KEGG   Pseudomonas azotoformans: AYR47_02660
Entry
AYR47_02660       CDS       T04879                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pazo  Pseudomonas azotoformans
Pathway
pazo02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pazo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AYR47_02660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pazo03021]
    AYR47_02660
Transcription machinery [BR:pazo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AYR47_02660
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Sigma70_ECF HTH_24
Other DBs
NCBI-ProteinID: AMN77292
LinkDB
Position
complement(570673..571182)
AA seq 169 aa
MASSSSAHQVVGELYAQHHSWVVQLLRRKLGGQEQALDLAQDTFVRILSSGTVPVFREPR
AYLTTVASRLCGQYFRRQALERAYEQSLTILEPEHMPSPETRLLVLEALDAVGQVLDGLG
SKVREIFLLSQLDGLTYPQIAERMNLSVNVVQKAMLKAYRHCYLAVYAA
NT seq 510 nt   +upstreamnt  +downstreamnt
atggcctcatcttcttctgcccatcaggtcgtgggcgagctctatgcccagcatcacagc
tgggtagtgcagttgctgcggcgcaagttgggcgggcaggagcaggctctggacctggcg
caggataccttcgtgcggattttgagcagcggcaccgtgccggttttccgtgagccgcgt
gcttatctgacgacggttgccagccgtttgtgtgggcagtatttccgtcgtcaggcgctg
gagcgcgcctatgagcaatcactgacgatcctggaacccgagcacatgccttcaccggaa
acccgcttgctggtactcgaagcgctggatgcagtaggccaggtgctggacgggctgggc
agcaaggtgcgcgagattttcctgctgtcccagttggatggcctgacttatccacagatc
gccgaacgcatgaacctcagcgtgaatgtggtgcaaaaagccatgctcaaagcctatcgc
cattgctacctggcggtgtacgcggcatga

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