Pseudomonas azotoformans: AYR47_06545
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Entry
AYR47_06545 CDS
T04879
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pazo
Pseudomonas azotoformans
Pathway
pazo03420
Nucleotide excision repair
pazo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pazo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AYR47_06545 (uvrD)
03430 Mismatch repair
AYR47_06545 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pazo03400
]
AYR47_06545 (uvrD)
Enzymes [BR:
pazo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AYR47_06545 (uvrD)
DNA repair and recombination proteins [BR:
pazo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AYR47_06545 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AYR47_06545 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
HTH_TIMELESS
Motif
Other DBs
NCBI-ProteinID:
AMN78008
UniProt:
A0A127HTZ5
LinkDB
All DBs
Position
1394323..1396506
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLAQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACARAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSEDFPDAVTIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINIPARGI
GEKTVEAIRDHARHADVSMWEAMRLLIVNKGLTGRAAGALGVFVELIENLAAKCAEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARAFENTEEDEELTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQNSSSMFAGSEIPETQFSLGQQVRHSVFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLEAV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctcccttttgctgaactccctcaacgatgcccaacgccaggccgta
gcggcccccgttggccgtcagttggtcctggccggtgctggctccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgaaaacgcgtccccgcattccatcctg
tcggtgaccttcaccaacaaggccgctgccgagatgcgccaccgcatcgagcagttgatg
ggcatcagcccggccggcatgtgggtcggcaccttccacggcctggcgcaccgcctgctg
cgggcgcactggcaggaggcgggcctggcccagaccttccagatcctcgacagcgatgac
cagcaacgcctggtcaagcgcgtgatacgcgagctgggcctcgacgaacagcgttggcca
gcgcgtcaggcacagtggtttatcaacggccagaaagacgaaggcctgcgcccgcaacat
atccaggccagcggcgatttgttcctggcgaccatgcgcagcatctatgaagcctacgag
gccgcctgtgcacgcgccggggtcatcgacttctccgagctgctgctgcgcgccctcgac
ctgtggcgcgacaacccaggcctgttggcccattaccagaaacgcttccgccacatcctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggttgcgcctgctggccaag
ggcggcgacagcctgatggtagtgggcgacgacgaccagtcgatctacggctggcgtggc
gcgaaaatcgagaacatctaccagtactccgaagacttcccggacgcggtgaccatccgt
ctggaacagaactaccgctccaccgccgggatcctcaaggccgccaacgccttgatcgcc
aacaacaccgggcgcctgggcaaagagctgtggaccgacggcggcgaaggcgaggcgatc
aacctgtacgccgccttcaatgagcacgatgaagcacgctacgtggtggaaaccatcgaa
agcgcgctgaaaaccggcctggcgcgcagtgacatcgcgattctgtaccgttccaacgcc
caatcgcgggtattggaagaagccttgctgcgcgaacgcatcccgtaccgcatctatggt
ggccagcgcttcttcgagcgtgccgaaatcaagaacgccatggcctacctgcgtttgctg
gaaggtcgcggcaacgatgcggcgctggaacgggtgatcaacatcccggcgcgcggcatc
ggcgagaaaaccgtcgaggcgattcgcgaccacgcgcgccatgccgatgtgtcgatgtgg
gaagccatgcgcttgctcatcgtcaataaaggcctgaccggccgcgcagccggcgctttg
ggtgtgtttgtcgaactgatcgagaacctggcagccaagtgcgcggaaatgccgttgcac
ctgatgacccagacggtgatcgaacagtccgggctgatcgcctaccacgaggcggaaaaa
ggcgagaaaggccaggcccgggtagaaaaccttgaggaactggtaagcgctgcccgtgcc
ttcgaaaacaccgaggaagatgaagagctgacgccgctggctgctttcctcggccatgcg
tcgctggaagccggcgatacccaggcggatgagcatgaagacagcatccagctgatgacc
ttgcacagcgccaagggcctggaattcccgtacgtgttcctggtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagagcccggccgtcttgaggaagaacgccgcctg
gcgtacgtgggtatcacccgcgccatgcagaacctggtgatgacctacgccgagacccga
cgcctgtacggcagcgagacttacaacaaggtgtcgcgcttcgtacgtgaagtaccgaag
ggtctgatccaggaagtgcgcctgtccaacagcgtcagccgcccgttcggcggcgggcag
cagcagaactccagcagtatgttcgcgggttccgagattccggaaacccagttcagcctt
ggccagcaggtcaggcattcggtgttcggcgaaggcgtgatcctcaacttcgaaggcgct
ggtgcacaggcccgggtgcaggtgaacttcgccgaaggcagcaagtggctgatgatgggc
tacgcgaagctcgaagccgtctga
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