Pseudomonas azotoformans: AYR47_07470
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Entry
AYR47_07470 CDS
T04879
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pazo
Pseudomonas azotoformans
Pathway
pazo03030
DNA replication
pazo03410
Base excision repair
pazo03420
Nucleotide excision repair
pazo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pazo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYR47_07470
03410 Base excision repair
AYR47_07470
03420 Nucleotide excision repair
AYR47_07470
03440 Homologous recombination
AYR47_07470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pazo03032
]
AYR47_07470
03400 DNA repair and recombination proteins [BR:
pazo03400
]
AYR47_07470
Enzymes [BR:
pazo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AYR47_07470
DNA replication proteins [BR:
pazo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AYR47_07470
DNA repair and recombination proteins [BR:
pazo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AYR47_07470
NER (nucleotide excision repair)
GGR (global genome repair) factors
AYR47_07470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AMN78179
UniProt:
A0A127HUJ8
LinkDB
All DBs
Position
1592491..1595268
Genome browser
AA seq
925 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPNSPFAVVFD
AKGGTFRDDMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTLAR
SSAAANRPVVISTGDKDMAQLVDGHITLVNTMTGSSMDIDGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGIKELYEQLDIVPTLPIRGAKTLPAKLEEHRES
AFLSYQLATIKCDVPLDVGLDDLHLIEPDREKLLELYTLLEFKSWFDEIQRDAKRVELKA
APAVEEVVEAVAPAEASYTTILDQATFDIWLKKLNDAKLIAFDTETTGIDAQQAQLVGVS
FAVQPHEAAYIPLTHSYIGAPEQLDRDTVLLALKPLLEDPSKLKVGQHAKFDMNILANCA
IGGDPANGITVRGIAFDTMLESYVLNSTATRHDMDSLAKKYLDYDTVAFQDIAGKGAKQL
TFDQIALEQAGPYAAEDADITLRLHQALFAQLSAIPSLASVLTEIEIPLVPVLARIERQG
ALVDKDLLGIQSIELGNKMVELERQAFEIAGEEFNLGSPKQLGAILYEKLGLPVLKKTGK
GQASTAEEVLAKLAEDDYPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAV
AATGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKMLAADYSQIELRIMAHLSKDEGL
MNAFRDNLDVHTATAAEVFKVELGEVTSDQRRSAKAINFGLIYGMGAQKLGKDIGVDTKT
AKAYIDVYFARYPGVREYMERTRAQAADQGYVETFFGRRLYLPDINSNKPQERAAAERTA
INAPMQGTAADIIKKAMVRVDNWLTESGLDAKVILQVHDELVLEVREDLVAQVSEKIREH
MSAAAQLDVPLLVEVGVGNNWDEAH
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcacccctcgtcctggtggacggttcttcttatctgtaccgcgccttccac
gcgctgccaccgctgaccacctccaaaggcctgcccaccggtgcggtcaagggcgtgttg
aacatgctcaaaagcctgcgcaagcagtacccgaacagcccgttcgcggtggtgttcgac
gccaagggtgggacctttcgcgatgacatgtacgccgaatacaaggccaaccgcccgagc
atgcccgatgacatgcgcctgcagatcgagcccctgcaccagagcgtgatcgccctgggt
ttcccgttgctctgcgtcgaaggcgtcgaggccgatgacgtcatcggcaccctggcccgc
agcagcgcggcagccaaccgcccggtggtgatctcgaccggtgacaaggacatggcgcag
ctggtcgacgggcacattaccttggtcaacaccatgaccggtagttcgatggatatcgac
ggcgtaaaggagaaattcggcgtcgcaccggagcagattatcgactacctggcgctgatg
ggcgattcgtccgacaacattccaggcgttccgggcattggtcccaagactgcttccggc
ttgctcgtcggcgtgaacggcggcatcaaagagctctatgagcagctggatatcgtgccg
accctgcctatccgtggcgccaaaaccctgccggccaagttggaagagcatcgcgagagt
gcatttctttcctaccagttggcgacgatcaagtgcgatgtgccattggatgtcggcctg
gatgacctgcacctgatcgagccggatcgcgagaagctgctggagttgtacaccctgctg
gagttcaagagctggtttgatgaaatacagcgtgacgccaagcgtgtggagctcaaggcg
gcgcctgctgttgaggaagtcgttgaggcagtggcgccagcagaggcgagctacaccacg
attctcgaccaggcgaccttcgacatctggttgaagaagctcaatgacgcgaagttgatc
gccttcgacaccgaaaccaccggtattgacgcccaacaggcgcagttggtcggcgtttcc
ttcgccgtccagccccatgaagcagcctacatcccgctgacccactcctacatcggcgcg
ccggagcagttggatcgcgacaccgtgctgctggccctcaagccgctgctggaagacccg
agcaagctcaaggtcggccagcatgccaagttcgacatgaacatcctggccaactgtgcc
attggtggcgatccggcgaatggtattaccgtgcgcggcatcgccttcgacaccatgctt
gaatcctatgtgctcaattccacggccacccgccacgacatggacagcctggccaagaag
tacctggactacgacaccgtcgccttccaggacatcgccggcaaaggcgccaagcagctg
acattcgaccagatcgcgctggagcaggctggcccgtatgcggcggaagacgccgatatc
accttgcgcctgcaccaggcgctgtttgcacaactgtccgccatcccgagcctggcgagc
gtgctcacggagatcgaaatcccgttggtgccggtcttggcgcgtatcgaacgccagggc
gcgctggtcgacaaggatctgctgggcatccagagcatcgagctgggcaacaagatggtc
gaactggagcgccaggcgttcgagatcgccggcgaggagttcaacctgggctcgcccaag
cagctcggcgcaatcctttacgagaaactcggcctgccggtactgaagaaaaccggcaag
ggccaggcctccacagccgaagaagtgctggccaagctggccgaagatgactatccgctg
cccaaggtgctgatgcagtaccgcagcatgagcaagctgaaaagcacctacaccgatcgc
ctgccggagcagatcaacccgcgcaccgggcgcatccacacctcctatcaccaggcggtg
gcggccaccgggcgcttgtcgtccagtgatccgaacctgcagaacatcccggtgcgtacc
gccgaagggcggcgcattcgccaggcgttcgtcgcgcccaagggctacaaaatgttggcg
gcggactactcgcagatcgaactgcggatcatggcgcacctgtccaaggacgaaggcctg
atgaacgccttccgcgacaacctggatgtgcacaccgctacggcggcagaagtgttcaag
gtcgagctgggcgaggtcacctcggatcagcgtcgcagcgccaaggcgatcaacttcggc
ctgatctatggcatgggcgcgcagaagctcggtaaggacattggcgtcgataccaagacg
gccaaggcgtatatcgatgtgtatttcgcccgttatcccggcgtgcgcgaatacatggag
cgcacccgtgcccaggcggctgatcaaggttatgtcgagacgttcttcggtcgtcgcctg
tacttgccggacatcaactccaacaagccccaggagcgcgcagcggcagaacgtaccgcg
atcaacgcgccgatgcagggtacggcggcggatatcatcaagaaggccatggtgcgggtg
gacaactggctgactgagtcaggcctggatgccaaggtgatcctgcaggtgcacgatgaa
ctggtgctggaggtgcgtgaggacctggtggcgcaagtcagcgagaagattcgcgaacac
atgagcgctgccgcacagctggatgtaccgttgctggtggaagtgggcgtgggcaacaac
tgggacgaagcgcactga
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