Pseudomonas azotoformans: AYR47_09750
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Entry
AYR47_09750 CDS
T04879
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pazo
Pseudomonas azotoformans
Pathway
pazo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pazo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AYR47_09750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pazo03019
]
AYR47_09750
03009 Ribosome biogenesis [BR:
pazo03009
]
AYR47_09750
Messenger RNA biogenesis [BR:
pazo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AYR47_09750
Ribosome biogenesis [BR:
pazo03009
]
Eukaryotic type
Pre-60S particles
RNases
AYR47_09750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AMN78592
UniProt:
A0A127HVF6
LinkDB
All DBs
Position
2110219..2110761
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AA seq
180 aa
AA seq
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MQNPQNLIWIDLEMTGLNPDTDVIIEMATIVTDSNLNTLAEGPVIAIHHSDAVLATMDEW
NTRTHGNSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPICGNSICQDRRFLYTHMK
GLESYFHYRNLDVSTLKELAARWAPEVKDSFHKGSTHLALDDIRESIAELQHYRKHFIKA
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccacagaacctgatttggatcgatctggaaatgaccggtctgaaccccgac
accgacgtcatcatcgagatggcgaccattgtcaccgacagcaacctcaacaccttggcc
gaaggtccggtgatcgccatccaccacagcgatgccgtccttgccaccatggacgagtgg
aacacccgcacccacggcaactccggcctcacccagcgcgtgcgcgacagccgcatcagc
atggccgaagctgaggccgagaccatcgccttcctggaaaagtgggtgcccaagggcaag
tcgccgatctgcggcaacagcatctgccaggaccgtcgcttcctttatacccacatgaaa
gggctggaaagctacttccattaccgcaacctggatgtgtcgacactcaaagagctggcc
gcgcgttgggcgccggaagtcaaagacagcttccataaaggcagcacacatttggcgctg
gatgatattcgcgagtcgattgccgagctgcagcattaccgcaagcatttcatcaaagcg
tga
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