Pseudomonas azotoformans: AYR47_12270
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Entry
AYR47_12270 CDS
T04879
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pazo
Pseudomonas azotoformans
Pathway
pazo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pazo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AYR47_12270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pazo03019
]
AYR47_12270
Enzymes [BR:
pazo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AYR47_12270
Messenger RNA biogenesis [BR:
pazo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AYR47_12270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Ig_halo_2
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AMN79047
UniProt:
A0A127HX89
LinkDB
All DBs
Position
complement(2649941..2651404)
Genome browser
AA seq
487 aa
AA seq
DB search
MLKALKKMFGKSEAEPLAPDSSAPAPTAGSRNDGQQPARNAPAAQPKKPAVTPPEQAKPV
EPAAAPVAPKPRRERAPKPPVIPWKLEEFVVEPQEGKTRFHDFKLAPELMHAIQDLGFPY
CTPIQAQVLGFTLAGKDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIA
PTRELVVQIAKDAADLTKYTGLNVMTFVGGMDFDKQLKHLEARHCDILVATPGRLLDFNQ
RGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTEDVMNLAK
QWTTDPSIVEIEAENVASENVEQHIYAVAGADKYKLLYNLVNDNGWERVMVFANRKDEVR
RIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHIDGISHVIN
FTLPEVPDDYVHRIGRTGRAGAAGVSISFAGEDDSYQLPSIEALLGRKISCETPPTHLLR
AVERKRP
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaaagcactcaagaagatgttcggcaaaagcgaggctgagccgctcgcgcctgat
tccagtgctcctgccccgacagccggtagccgcaatgacggccaacaacccgcgcggaac
gcaccggctgcccagcccaagaagccagcggtgacaccgcctgaacaggcaaagccagtt
gaacctgctgccgcgccagtggcgccaaagccacgtcgcgaacgtgcgccaaagccgccg
gtgatcccatggaaactcgaagagtttgtcgtcgagccccaggaaggcaagacgcgtttc
cacgatttcaaactggcgcctgaactgatgcacgccatccaggacctggggttcccgtac
tgcacgccgatccaggcgcaggtgttgggcttcaccctggccggtaaagacgccatcggc
cgtgcccagaccggcaccggcaagaccgccgcgttcctgatctcgatcatcacccagttg
ctgcagacgccgccgccgaaagagcgctacatgggtgagccgcgcgcactgatcatcgcc
ccgacccgcgagctggtggtgcagatcgccaaggacgccgccgacctgaccaagtacacc
ggcctcaacgtcatgacgttcgtcggtggcatggacttcgacaagcagctcaagcacctt
gaagcccgtcactgcgacatcctggtggcgacaccgggccgcctgctggacttcaaccag
cgcggcgacgtgcacctggacatggtcgaagtgatggtgctggacgaagccgaccgcatg
ctcgacatgggcttcatcccacaagtgcgtcagatcattcgccagaccccgccgaaatcc
gagcgtcagaccctgctgttctccgcgaccttcaccgaagacgtgatgaacctcgccaag
cagtggaccaccgacccgtccatcgtcgagatcgaagcggaaaacgtcgccagcgaaaac
gtcgagcaacacatctatgccgtggccggtgccgacaagtacaagttgctctacaacctg
gtcaacgacaacggttgggagcgcgtgatggtgttcgccaaccgcaaggacgaagtgcgc
cgcatcgaagaacgcctggtgcgtgatggggtgaacgcggcgcaattgtccggcgatgtg
ccgcagcacaagcgtatcaagacgttggaaggcttccgcgaaggcaagattcgtgtgctg
gtggccactgacgtagcaggccgtgggattcacattgatggcatcagccatgtgatcaac
ttcaccctgccggaagtgccggatgattatgtgcaccggattggtcgtacgggccgtgcg
ggggctgcaggtgtgtcgatcagctttgcgggtgaggatgactcttaccaattgccgtcg
atcgaggcgttgctggggcgcaagatcagctgcgagacaccgccgacgcatttgttgcgg
gcggtggagcgtaagcggccttaa
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