Pseudomonas azotoformans: AYR47_18135
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Entry
AYR47_18135 CDS
T04879
Name
(GenBank) type VI secretion protein
KO
K11893
type VI secretion system protein ImpJ
Organism
pazo
Pseudomonas azotoformans
Pathway
pazo02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pazo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
AYR47_18135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pazo02044
]
AYR47_18135
Secretion system [BR:
pazo02044
]
Type VI secretion system
Imp/Vas secretion system core components
AYR47_18135
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AMN80111
UniProt:
A0A127I0G5
LinkDB
All DBs
Position
complement(3868028..3869374)
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AA seq
448 aa
AA seq
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MSSRNPVIWHEGLFVKPQHFQQQARAAEAAVHQRMQGLNDALYGFSELELNSEYLSFGKV
AITQARGIMPDGSVFDIPRDLAPPAPLEIADSSAVNQIVYLALPLRSNGALEVRWPDRYG
NSRYIAHREEIRDTHSDDGDQVGMDLAVPNLQLMLERSDRSAFTGIAIGRIKDKRPDGSL
VMDEHFYPTSLSLQAVPALHRYLGEVAGLMRARAQNLAQRIGSPGQSGVADVTDFNLLQT
LNRLFPLFQHLARQRQVHPERLYIALAQACGELVTFTDEGHLPQEYPAYQHDNLRESFQL
LEHTLRRALGTVLQPRAVSLPIVVQQYGVRTAALNDKRLLDNAEFILAVRAELPAETLRQ
QLPKQIKISSAEGLEQLVSLQLPGIPLLPLPVAPRHLPFHAGFSYFELDRHHPAWASLSS
GSGFGFHIAGEFPELELQFWAIRSEKDE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacgtaaccccgtcatctggcatgaaggtttgttcgtcaaaccccaacacttc
cagcaacaggcccgtgctgccgaagctgcggtgcatcaacgtatgcagggccttaacgac
gccctttacggcttcagcgagcttgagttgaacagcgaatatctgagcttcggcaaggtc
gccatcacccaggcgcgcgggatcatgcccgatggcagtgtgttcgatatcccacgcgac
ctggcgccacccgcgccgctggagattgccgacagcagcgcagtgaaccagatcgtctac
ctggctctgccgctgcgctccaacggcgccctcgaagtgcgctggcccgaccgctacggc
aacagccgctacatcgcccaccgcgaagaaatccgcgatacccacagcgatgacggcgat
caggtgggcatggacctggccgtgcccaacctgcaactgatgctcgaacgcagcgaccgc
agtgccttcaccggcatcgccatcggcagaatcaaagacaaacgcccggacggcagcctg
gtgatggacgagcacttctaccccactagcctgtccttgcaagcggtgccggcgctgcac
cgctatctgggcgaagtggccgggctgatgcgcgcacgcgcccagaacctggcccagcgt
attggctcgccggggcagtcaggcgtggccgacgtcaccgacttcaacctgctgcaaacc
ctcaaccgcttgttcccgttatttcaacacttggcccgccaacgccaggttcacccggaa
cggctgtacatcgcactggcccaggcttgcggcgaactggtgaccttcaccgatgaaggc
cacctgccccaggagtacccggcctaccagcacgacaacctgcgcgaatccttccagctg
ttggaacacaccctgcgccgagccttgggcaccgtgctgcaaccgcgtgcggtgtcgctg
ccgattgttgtgcagcaatacggcgtacgcactgcggccttgaacgacaagcgcctgctg
gacaacgccgagttcatcctcgcggtgcgggccgaactgcccgccgagaccctgcgccag
caactgcccaagcagatcaagatcagctccgccgagggcctggagcagctggtcagcctg
caactaccgggcatcccgctgctgccgctgccggtggcgccacggcacctgccgttccat
gccggcttcagctacttcgaactcgaccgccatcaccctgcctgggcaagcctgagcagc
ggcagtgggtttggcttccatatcgccggcgaattccccgagctggagttgcagttctgg
gcgatcaggagtgagaaagatgagtga
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