Pseudomonas azotoformans: AYR47_21695
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Entry
AYR47_21695 CDS
T04879
Symbol
gabD
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pazo
Pseudomonas azotoformans
Pathway
pazo00250
Alanine, aspartate and glutamate metabolism
pazo00310
Lysine degradation
pazo00350
Tyrosine metabolism
pazo00650
Butanoate metabolism
pazo00760
Nicotinate and nicotinamide metabolism
pazo01100
Metabolic pathways
pazo01120
Microbial metabolism in diverse environments
Module
pazo_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pazo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
AYR47_21695 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AYR47_21695 (gabD)
00310 Lysine degradation
AYR47_21695 (gabD)
00350 Tyrosine metabolism
AYR47_21695 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
AYR47_21695 (gabD)
Enzymes [BR:
pazo01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
AYR47_21695 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
AYR47_21695 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
AYR47_21695 (gabD)
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Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
AMN80755
UniProt:
A0A127I1L1
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All DBs
Position
complement(4718165..4719544)
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AA seq
459 aa
AA seq
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MLIVYNPATGEEIGRVAKHTANEVKAAVDRTCAAFPDWSSKLAKERSDILRRWHDAVKAD
KETFAELLCRENGKCLSEARGEIDYGLGFIEWYAEEAKRVYGDTIPTHDRNANVTVTKEA
IGPVAAITPWNFPFMMITRKVATALAAGCTMVIKPAEDTPLTALKLLEYARKAGIEAGVL
EVVVGDPKEIGQILTGDPRIRKISFTGSTGVGKLLAAQCAASIKKMTLELGGNAPFIVFQ
DANLDEAVKGLVSAKLRNSGQVCISPNRIFVQHSILEDFIKRLKHAVAEIEVDQGLREGF
VVGPMVNQLGFDKVARLVENAKAAGAKVLMGGQPHAKGGLFYEPTVLTGLQDDSPLATEE
IFGPVFALYSFKDEAEVIARANQTEFGLVAYAYTSALGRSLRLSRQLEAGMVILNSGSVG
TASVPFGGIKQSGYGREGSYYGIEEYVHVKYVLMAGAHL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcgtctacaaccctgccaccggtgaagaaatcggccgtgtcgccaagcacacc
gcaaacgaggtcaaggctgccgtcgaccgcacctgcgccgccttccctgactggtcttcc
aagcttgccaaggaacgcagcgacatcctgcgccgctggcacgacgcggtaaaagccgac
aaggaaaccttcgccgaactgctctgccgcgaaaacggcaaatgcctgagcgaagcccgc
ggtgaaatcgactacggcctgggctttatcgagtggtacgccgaggaggccaagcgcgtg
tacggcgacaccattcccactcacgaccgcaatgccaacgtgacggtcaccaaggaagcc
atcggcccggtcgccgccatcaccccgtggaacttcccgttcatgatgatcacccgcaag
gtcgccacagcgctggcggctggctgcaccatggtgatcaagcccgcagaagacaccccg
ctcacagccctcaagttgctggaatacgcgcgcaaggccgggatcgaggcaggcgtcctg
gaagtggtggtgggcgacccgaaagaaattggccagatcctgaccggcgacccacgcatc
cgcaaaatctcgttcaccggctccaccggcgtcggtaaattgcttgccgcacagtgcgca
gcgagcatcaagaaaatgaccctggaactgggcggcaacgcgccgtttatcgtgttccag
gacgccaacctcgacgaagcggtgaaaggactggtcagtgcaaaactgcgcaactcgggc
caggtgtgcatctcgccgaaccgcatcttcgtgcaacacagcatcctcgaggacttcatc
aagcgtttgaagcacgccgtggccgagatcgaagtggaccagggcttgcgtgaaggcttt
gtggtcggccccatggtcaatcaactgggcttcgacaaggtggcgcgactggtggaaaac
gccaaggccgccggggccaaggtattgatgggcggccagccccacgccaaaggtggcctg
ttctacgagccgacggtattgaccggcttgcaggacgattctcccctggcgaccgaggaa
atcttcgggccggtgttcgctctctattcgttcaaggatgaagccgaagtcatcgcccgc
gccaaccagaccgaattcggcctggtggcctacgcctacaccagcgctctgggacggtcg
ttgcgcctgtcgcgccagttggaggccggcatggtgatcctcaactccggatcagtgggc
actgcttccgtgccgtttggcggcatcaagcagtccggttatggccgtgaaggcagctat
tacgggatcgaggagtatgtgcacgtgaagtacgtgttgatggctggcgcacatttgtag
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