Pseudomonas azotoformans: AYR47_24035
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Entry
AYR47_24035 CDS
T04879
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pazo
Pseudomonas azotoformans
Brite
KEGG Orthology (KO) [BR:
pazo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pazo03400
]
AYR47_24035
DNA repair and recombination proteins [BR:
pazo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AYR47_24035
Archaeal homologous recombinant proteins
AYR47_24035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AMN81186
UniProt:
A0A127I307
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All DBs
Position
5255712..5256953
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AA seq
413 aa
AA seq
DB search
MRLFHTSDWHLGQNLHGQERDFEHACFLEWLLGQLNTHLPDVLLIAGDIFDTVNPPLKAQ
ERLYDFIISAHEQNPKLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDA
ERLLIPLPDAKGKIAAWCLALPFLRPAEVTGAHLGDDYLRGIGQVHEWLIAAANAKRKKG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFDRSVAYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYKHQILDVTFQGQCLVNVEPILIPRSVDLQRLEAAPLADILKAL
AELPDVDLLAETQRHPWLEVRVRLDEPQPDLRQQIESALQGKAVRLVRIAAEYAGNGSRE
DEGDDRLIELDQLTPQELFSRAWLDSYGSEVDEQTLKDFAVLLQEVQQEEEQP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgtttcacacctccgactggcacctgggccaaaacctccacggccaggaacgc
gacttcgaacacgcctgctttcttgagtggctgctgggccaactgaacacccatctgccg
gatgtgctgctgatcgccggcgatatcttcgacactgtcaacccgccgctcaaggcccag
gagcgtctgtatgacttcatcatcagcgcccacgaacagaaccccaagctgaccatcgtg
atgatcgcaggcaaccacgactccggctcgcgtattgagctgcccgcccccttgatgcgc
cgcctgcgtacccatgcattgggccgggtgctgtggctggatgacggccaactcgacgcc
gaacgcctgctgatcccgctgccggacgccaaaggcaagatcgccgcctggtgcctggcg
ctgccgttcctgcgcccggcggaagtgaccggcgcgcacctgggtgacgactacctgcgc
ggcatcggccaggtgcatgaatggctgatcgccgccgccaacgccaagcgcaaaaaaggc
caggcgctgattgccatcagccacgcgcacatggccggtggctcggtgtcggaagactct
gagcgcagcctgatcatcggcaatgccgaggcgctgccggccagtctgtttgatcgaagt
gtcgcttacgtcgccctcggccatttgcacaagccgcagaaggtcaatggcgaagaacgc
attcgctatagcggttcgccaattccgctgtcgttttccgaaatcggctacaagcaccag
atcctcgacgtgacgttccagggccaatgcctggtgaacgtcgaaccgatcctgattccg
cgctcggtcgacctgcaacgcctggaagccgcgccgctggccgatatcctcaaggccctg
gccgagttgcccgacgtcgatctgctggccgaaacccagcgccacccttggctggaagtg
cgcgtgcgcctcgacgagccgcaacccgacctgcgccagcagatcgaaagcgccctgcaa
ggcaaggccgtgcgcctggtgcgcatcgccgctgaatacgcaggtaacggcagccgtgaa
gacgaaggcgacgaccgcctgatcgaactcgaccagctcacgccccaggaactgttcagc
cgcgcctggctggacagttatggcagtgaagtggatgaacagaccttgaaggacttcgcc
gtgctgctccaggaagtgcaacaggaggaggaacagccatga
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