Pseudomonas azotoformans: AYR47_24235
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Entry
AYR47_24235 CDS
T04879
Name
(GenBank) type VI secretion protein
KO
K11900
type VI secretion system protein ImpC
Organism
pazo
Pseudomonas azotoformans
Pathway
pazo02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pazo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
AYR47_24235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pazo02044
]
AYR47_24235
Secretion system [BR:
pazo02044
]
Type VI secretion system
Imp/Vas secretion system core components
AYR47_24235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
AMN81222
UniProt:
A0A127I2Y1
LinkDB
All DBs
Position
complement(5306802..5308277)
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AA seq
491 aa
AA seq
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MTTQQHTLPAPTDDQFSILDNIVAQTLLSADDEAYGIAKRGVSAFIEELIKPQNRGEPVK
KRLVDRMIAEIDTKLSLQMDEILHHPQFQALEAAWKGLQLLVDRTNFRENIKIELLNVSR
QDLLEDFEDSPEVTQSGLYKHIYSAEYGQFGGQPVGAIIANYFLSPSAPDVKLMQYASSV
ACMAHAPFIAAAGPAFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRLSEDARYIGLTVP
RFLLRTPYDPVECPVKTFAYQENVVNSHEHYLWGNTAYAFATRLTDSFARFRWCPNIIGP
QSGGAVEDLPLHHFQSMGEIETKIPTEVLVSDRREYELAQEGFIALTMRKGSDNAAFFSA
SSVQKPKHFGLSPEGREAELNYRLGTQLPYMMVVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAARIVVSDVDGEPGWYRVNLSVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacaacaacacacactgccagcacccaccgatgatcaattcagcattctcgac
aacatcgttgcccagactctgctgagtgcagacgacgaggcgtatggcattgccaagcgg
ggcgtctcggcgttcatcgaagagctgatcaaaccgcagaatcgtggtgagcccgtcaag
aaacgcttggtcgaccggatgattgccgagatcgacacgaagctcagcctgcagatggat
gagattttgcaccacccgcaattccaggctctggaagccgcctggaagggattgcagttg
ttggttgaccgtaccaacttccgcgagaacatcaagatcgaactgctgaacgtctcccgg
caagacctgttggaagatttcgaggattcaccggaagtgacccagtccgggttgtacaaa
catatctacagtgctgagtatggtcagtttggtggtcagcctgtgggcgcgattatcgcc
aactactttctgtctcccagtgcacccgacgtgaaactgatgcagtacgcatccagcgtg
gcctgcatggcccatgcgccattcatcgccgctgccgggccggcgttcttcgggttggag
agttttaccggcctgccggacctgaaagacctgaaggaccacttcgaaggtcctcaattt
gccaaatggcaaagttttcgcctaagcgaagacgcacgctatatcggcttgaccgtgccg
cgctttctgctccgtacgccttacgatccagttgagtgtccggtcaagaccttcgcttat
caggaaaacgtggtcaacagccatgaacattacctgtggggcaacacggcatacgccttt
gccacgcgcctgactgacagcttcgcgcgctttcgctggtgcccgaatatcatcggcccg
caaagcggtggtgcggtggaagacttgccgctgcatcacttccagagcatgggtgagatc
gaaaccaaaatcccgacggaagtgctggtttccgaccgccgtgagtacgagctggcgcaa
gagggcttcattgccttgacgatgcgcaaaggcagcgataatgccgcgtttttctccgcc
agttcggtgcagaagccgaaacactttggcctcagtcccgagggcagggaagccgagctg
aattaccgcttgggtacccaattgccctacatgatggtggtcaatcgcctggcccactac
cttaaggttcttcagcgcgagcaattgggttcgtggaaggagcgcacagacctggagctg
gaactcaataaatggattcgccagtacgtcgccgatcaggaaaaccccagtgccgaagtg
cgtggacgacggccattgcgcgcggcgcgcatcgttgtcagtgatgtcgacggcgagccc
ggctggtaccgcgtcaacctgagtgtacggccgcacttcaagtacatgggggccgacttc
acgctgtccctggtcggcaagctcgataaagaatga
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