KEGG   Pseudomonas azotoformans: AYR47_24235
Entry
AYR47_24235       CDS       T04879                                 
Name
(GenBank) type VI secretion protein
  KO
K11900  type VI secretion system protein ImpC
Organism
pazo  Pseudomonas azotoformans
Pathway
pazo02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:pazo00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    AYR47_24235
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pazo02044]
    AYR47_24235
Secretion system [BR:pazo02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AYR47_24235
SSDB
Motif
Pfam: VipB VipB_2 VMAP-M0
Other DBs
NCBI-ProteinID: AMN81222
UniProt: A0A127I2Y1
LinkDB
Position
complement(5306802..5308277)
AA seq 491 aa
MTTQQHTLPAPTDDQFSILDNIVAQTLLSADDEAYGIAKRGVSAFIEELIKPQNRGEPVK
KRLVDRMIAEIDTKLSLQMDEILHHPQFQALEAAWKGLQLLVDRTNFRENIKIELLNVSR
QDLLEDFEDSPEVTQSGLYKHIYSAEYGQFGGQPVGAIIANYFLSPSAPDVKLMQYASSV
ACMAHAPFIAAAGPAFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRLSEDARYIGLTVP
RFLLRTPYDPVECPVKTFAYQENVVNSHEHYLWGNTAYAFATRLTDSFARFRWCPNIIGP
QSGGAVEDLPLHHFQSMGEIETKIPTEVLVSDRREYELAQEGFIALTMRKGSDNAAFFSA
SSVQKPKHFGLSPEGREAELNYRLGTQLPYMMVVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAARIVVSDVDGEPGWYRVNLSVRPHFKYMGADF
TLSLVGKLDKE
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgacgacacaacaacacacactgccagcacccaccgatgatcaattcagcattctcgac
aacatcgttgcccagactctgctgagtgcagacgacgaggcgtatggcattgccaagcgg
ggcgtctcggcgttcatcgaagagctgatcaaaccgcagaatcgtggtgagcccgtcaag
aaacgcttggtcgaccggatgattgccgagatcgacacgaagctcagcctgcagatggat
gagattttgcaccacccgcaattccaggctctggaagccgcctggaagggattgcagttg
ttggttgaccgtaccaacttccgcgagaacatcaagatcgaactgctgaacgtctcccgg
caagacctgttggaagatttcgaggattcaccggaagtgacccagtccgggttgtacaaa
catatctacagtgctgagtatggtcagtttggtggtcagcctgtgggcgcgattatcgcc
aactactttctgtctcccagtgcacccgacgtgaaactgatgcagtacgcatccagcgtg
gcctgcatggcccatgcgccattcatcgccgctgccgggccggcgttcttcgggttggag
agttttaccggcctgccggacctgaaagacctgaaggaccacttcgaaggtcctcaattt
gccaaatggcaaagttttcgcctaagcgaagacgcacgctatatcggcttgaccgtgccg
cgctttctgctccgtacgccttacgatccagttgagtgtccggtcaagaccttcgcttat
caggaaaacgtggtcaacagccatgaacattacctgtggggcaacacggcatacgccttt
gccacgcgcctgactgacagcttcgcgcgctttcgctggtgcccgaatatcatcggcccg
caaagcggtggtgcggtggaagacttgccgctgcatcacttccagagcatgggtgagatc
gaaaccaaaatcccgacggaagtgctggtttccgaccgccgtgagtacgagctggcgcaa
gagggcttcattgccttgacgatgcgcaaaggcagcgataatgccgcgtttttctccgcc
agttcggtgcagaagccgaaacactttggcctcagtcccgagggcagggaagccgagctg
aattaccgcttgggtacccaattgccctacatgatggtggtcaatcgcctggcccactac
cttaaggttcttcagcgcgagcaattgggttcgtggaaggagcgcacagacctggagctg
gaactcaataaatggattcgccagtacgtcgccgatcaggaaaaccccagtgccgaagtg
cgtggacgacggccattgcgcgcggcgcgcatcgttgtcagtgatgtcgacggcgagccc
ggctggtaccgcgtcaacctgagtgtacggccgcacttcaagtacatgggggccgacttc
acgctgtccctggtcggcaagctcgataaagaatga

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