KEGG   Pseudomonas azotoformans: AYR47_24460
Entry
AYR47_24460       CDS       T04879                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
pazo  Pseudomonas azotoformans
Pathway
pazo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pazo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AYR47_24460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pazo03400]
    AYR47_24460
DNA repair and recombination proteins [BR:pazo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AYR47_24460
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AYR47_24460
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_21 SMC_N nSTAND1 AAA_29 DnaJ_CXXCXGXG AAA_16 AAA_25 Anti-TRAP
Other DBs
NCBI-ProteinID: AMN81267
UniProt: A0A127I3L2
LinkDB
Position
complement(5359677..5362196)
AA seq 839 aa
MTSQRNIPAITAQPSGFVRVRGAREHNLRNVDVDIPRDALVVFTGVSGSGKSSLAFSTVY
AEAQRRYFESVAPYARRLIDQVGVPDVDSIEGLPPAVALQQQRGTPSARSSVGSVTTLSS
LIRMLYSRAGSYPPGQPMLYAEDFSPNLPQGACPQCHGLGRVYEVTEALMVPDPSLTLRQ
RAVASWPLAWQGQNQRDILVTLGYDVDIPWRDLPKKQRDWILFTEDTPTAPVYAGFTPEQ
TRDALKRKLEPSYQGTFMGARRYILHTFAHTQSALMKKRVSQFMQGSACPLCEGKRLTKA
ALSVKFAGVDIGELSQLSLAQLAELLRPVAAGQDKMKLSVEKRLAAQRIAQDLLERVSTL
TELGLGYLSLERSTPTLSSGELQRLRLATQLGSQLFGVIYVLDEPSAGLHPADGEALFTA
LERLKAAGNSLFVVEHDLETMRRADWLIDVGPAAGEHGGQVLYSGPPAGLAQVQASQTRE
YLFADKRVSEQARREPTGWLKLQGVTRNNLKDLNVDFPLGCFTAVTGISGSGKSSLVSQA
LLELVGAGLGRVVENDEEPSLEDDAPQTSGGHISAGLEHIRRLVQVDQKPIGRTPRSNLA
TYTGLFDNVRKLFAATPAAKKRHYDAGQFSFNVAKGRCPNCEGEGFVSVELLFMPSVYAP
CPTCHGARYNPETLAVKWQGLTIAQVLGLTVEQAVDVFAEQPSVLRSLQVLRDIGLGYLR
LGQPATELSGGEAQRIKLATELQRNARGATLYVLDEPTTGLHPRDVDRLLSQLNHLVDAG
HTVVVVEHEMRVVAQSDWVIDIGPGAGDLGGKVVVSGTPQKVAKSKVSRTAPFLARELV
NT seq 2520 nt   +upstreamnt  +downstreamnt
atgacttcacagcgcaacatccctgcgatcactgcccagccaagcggtttcgtccgcgtg
cgcggcgcccgcgagcacaacctgcgtaacgtcgatgtggatattccccgggatgccctg
gtggtgtttaccggcgtgtcgggttccggcaaatcgtccctggcgttttccacggtgtat
gccgaggcgcaacggcgttatttcgagtcggtggcgccttatgcgcggcggctgatcgac
caggtcggcgtgccggacgtggacagcatcgaaggcctgccgcccgccgtggccctgcaa
cagcagcgcggcacgccgagtgcacgctcgtcggtgggcagcgtgacgacgctgtcgagc
ctgatccgcatgctgtactcccgcgccggcagctatccgccggggcaaccgatgctgtac
gccgaagacttctcgcccaacctgccccagggcgcgtgcccgcaatgccatggcctgggc
cgcgtgtacgaggtgaccgaagcgctgatggtgccggacccttcgctgaccctccgccag
cgtgcggtggcgtcgtggccattggcgtggcaaggccagaaccagcgcgacatcctggtg
acgttgggctacgacgtggatatcccctggcgtgatctaccgaaaaagcagcgcgactgg
atcctgttcaccgaggacacccccaccgcaccggtctacgccggcttcacgccggaacag
acccgcgacgcgctcaagcgcaaactggagccgagctaccaaggcaccttcatgggcgcc
cggcgctacatcctgcacaccttcgcccacacccagagcgcgctgatgaagaagcgcgtg
tcgcagttcatgcagggcagcgcctgcccgctgtgcgagggcaaacgcctgaccaaggcg
gcactgtcggtgaagtttgccggggtggacatcggtgagttgtcgcagttgtcgttggcg
caattggccgagttgctgcggccagtggcggcggggcaagacaagatgaaactgtcggtg
gaaaaacgcctggctgcccagcggattgcccaggatttgctggagcgggtcagcacgttg
accgagttgggcctgggttatttgtctttggaacgcagcacaccaaccctgtcatcaggg
gagttgcaacggttgcgtttggcgacccagttgggttcgcagttgttcggcgtgatctat
gtgctggatgaaccctcggcgggcctgcatccggcggatggcgaggcgttattcaccgcc
ctggaacgtttgaaagccgcgggcaattcgttgtttgtggtggaacacgacctggaaacc
atgcgccgcgccgattggctgatcgatgtcggcccggccgccggcgagcatggcgggcag
gtgttgtacagcggcccgccggcaggattggcgcaggtgcaggcgtcgcagacccgtgag
tatttgtttgctgacaagcgtgtatcggagcaagcgcgccgcgagccgaccggctggctg
aaactgcaaggggtgacgcgcaataatctcaaggacctgaacgtcgatttcccgttgggc
tgcttcacggcggtcaccgggatttccgggtcgggcaagtccagcctggtcagccaggcg
ctgctggagctggtgggcgccggtcttggtcgcgtggtggaaaacgacgaagaaccgagc
ctggaagacgacgcgccgcaaaccagcggcgggcacatcagcgccgggctggagcatatc
cgccgcctggtgcaggtggaccagaagcccatcggccgcaccccgcgctccaacctggcg
acctataccggcctgttcgacaacgtgcgcaagctgttcgcggccactccggcggcgaag
aagcgtcactacgatgccgggcaattctcgttcaacgtcgccaagggccgttgcccgaac
tgcgaaggggaaggttttgtcagtgtcgagttgctgttcatgcccagcgtgtacgcaccg
tgcccgacctgtcatggagcgcgctacaaccccgagaccctggcggtgaaatggcaaggc
ttgaccatcgcccaagtattggggctgacggtggagcaagcggtggacgtgtttgccgag
caaccgagtgtgctgcgctcgttgcaggtgctgcgggacatcggcctgggttatctgcgc
ctgggccaaccggccactgagttgtcgggcggtgaagcgcagcgcatcaagctggcgacc
gagctgcaacgcaatgcgcggggcgcgaccctgtatgtgctggatgagccgactaccggg
ctgcatccacgggatgtggaccgcttgctcagccagttgaatcatctggtggacgcgggg
catacggtggttgtggtggagcatgagatgcgcgtggtggcgcagagtgattgggtgatt
gatatcgggccgggggcgggggatttgggggggaaggtggttgtcagtggtacgccgcag
aaagttgcgaaaagcaaggtgagccggactgcgccgtttctggctcgagagctggtctaa

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