Pseudomonas azotoformans: AYR47_24460
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Entry
AYR47_24460 CDS
T04879
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
pazo
Pseudomonas azotoformans
Pathway
pazo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pazo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AYR47_24460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pazo03400
]
AYR47_24460
DNA repair and recombination proteins [BR:
pazo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AYR47_24460
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AYR47_24460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
SMC_N
nSTAND1
AAA_29
DnaJ_CXXCXGXG
AAA_16
AAA_25
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
AMN81267
UniProt:
A0A127I3L2
LinkDB
All DBs
Position
complement(5359677..5362196)
Genome browser
AA seq
839 aa
AA seq
DB search
MTSQRNIPAITAQPSGFVRVRGAREHNLRNVDVDIPRDALVVFTGVSGSGKSSLAFSTVY
AEAQRRYFESVAPYARRLIDQVGVPDVDSIEGLPPAVALQQQRGTPSARSSVGSVTTLSS
LIRMLYSRAGSYPPGQPMLYAEDFSPNLPQGACPQCHGLGRVYEVTEALMVPDPSLTLRQ
RAVASWPLAWQGQNQRDILVTLGYDVDIPWRDLPKKQRDWILFTEDTPTAPVYAGFTPEQ
TRDALKRKLEPSYQGTFMGARRYILHTFAHTQSALMKKRVSQFMQGSACPLCEGKRLTKA
ALSVKFAGVDIGELSQLSLAQLAELLRPVAAGQDKMKLSVEKRLAAQRIAQDLLERVSTL
TELGLGYLSLERSTPTLSSGELQRLRLATQLGSQLFGVIYVLDEPSAGLHPADGEALFTA
LERLKAAGNSLFVVEHDLETMRRADWLIDVGPAAGEHGGQVLYSGPPAGLAQVQASQTRE
YLFADKRVSEQARREPTGWLKLQGVTRNNLKDLNVDFPLGCFTAVTGISGSGKSSLVSQA
LLELVGAGLGRVVENDEEPSLEDDAPQTSGGHISAGLEHIRRLVQVDQKPIGRTPRSNLA
TYTGLFDNVRKLFAATPAAKKRHYDAGQFSFNVAKGRCPNCEGEGFVSVELLFMPSVYAP
CPTCHGARYNPETLAVKWQGLTIAQVLGLTVEQAVDVFAEQPSVLRSLQVLRDIGLGYLR
LGQPATELSGGEAQRIKLATELQRNARGATLYVLDEPTTGLHPRDVDRLLSQLNHLVDAG
HTVVVVEHEMRVVAQSDWVIDIGPGAGDLGGKVVVSGTPQKVAKSKVSRTAPFLARELV
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgacttcacagcgcaacatccctgcgatcactgcccagccaagcggtttcgtccgcgtg
cgcggcgcccgcgagcacaacctgcgtaacgtcgatgtggatattccccgggatgccctg
gtggtgtttaccggcgtgtcgggttccggcaaatcgtccctggcgttttccacggtgtat
gccgaggcgcaacggcgttatttcgagtcggtggcgccttatgcgcggcggctgatcgac
caggtcggcgtgccggacgtggacagcatcgaaggcctgccgcccgccgtggccctgcaa
cagcagcgcggcacgccgagtgcacgctcgtcggtgggcagcgtgacgacgctgtcgagc
ctgatccgcatgctgtactcccgcgccggcagctatccgccggggcaaccgatgctgtac
gccgaagacttctcgcccaacctgccccagggcgcgtgcccgcaatgccatggcctgggc
cgcgtgtacgaggtgaccgaagcgctgatggtgccggacccttcgctgaccctccgccag
cgtgcggtggcgtcgtggccattggcgtggcaaggccagaaccagcgcgacatcctggtg
acgttgggctacgacgtggatatcccctggcgtgatctaccgaaaaagcagcgcgactgg
atcctgttcaccgaggacacccccaccgcaccggtctacgccggcttcacgccggaacag
acccgcgacgcgctcaagcgcaaactggagccgagctaccaaggcaccttcatgggcgcc
cggcgctacatcctgcacaccttcgcccacacccagagcgcgctgatgaagaagcgcgtg
tcgcagttcatgcagggcagcgcctgcccgctgtgcgagggcaaacgcctgaccaaggcg
gcactgtcggtgaagtttgccggggtggacatcggtgagttgtcgcagttgtcgttggcg
caattggccgagttgctgcggccagtggcggcggggcaagacaagatgaaactgtcggtg
gaaaaacgcctggctgcccagcggattgcccaggatttgctggagcgggtcagcacgttg
accgagttgggcctgggttatttgtctttggaacgcagcacaccaaccctgtcatcaggg
gagttgcaacggttgcgtttggcgacccagttgggttcgcagttgttcggcgtgatctat
gtgctggatgaaccctcggcgggcctgcatccggcggatggcgaggcgttattcaccgcc
ctggaacgtttgaaagccgcgggcaattcgttgtttgtggtggaacacgacctggaaacc
atgcgccgcgccgattggctgatcgatgtcggcccggccgccggcgagcatggcgggcag
gtgttgtacagcggcccgccggcaggattggcgcaggtgcaggcgtcgcagacccgtgag
tatttgtttgctgacaagcgtgtatcggagcaagcgcgccgcgagccgaccggctggctg
aaactgcaaggggtgacgcgcaataatctcaaggacctgaacgtcgatttcccgttgggc
tgcttcacggcggtcaccgggatttccgggtcgggcaagtccagcctggtcagccaggcg
ctgctggagctggtgggcgccggtcttggtcgcgtggtggaaaacgacgaagaaccgagc
ctggaagacgacgcgccgcaaaccagcggcgggcacatcagcgccgggctggagcatatc
cgccgcctggtgcaggtggaccagaagcccatcggccgcaccccgcgctccaacctggcg
acctataccggcctgttcgacaacgtgcgcaagctgttcgcggccactccggcggcgaag
aagcgtcactacgatgccgggcaattctcgttcaacgtcgccaagggccgttgcccgaac
tgcgaaggggaaggttttgtcagtgtcgagttgctgttcatgcccagcgtgtacgcaccg
tgcccgacctgtcatggagcgcgctacaaccccgagaccctggcggtgaaatggcaaggc
ttgaccatcgcccaagtattggggctgacggtggagcaagcggtggacgtgtttgccgag
caaccgagtgtgctgcgctcgttgcaggtgctgcgggacatcggcctgggttatctgcgc
ctgggccaaccggccactgagttgtcgggcggtgaagcgcagcgcatcaagctggcgacc
gagctgcaacgcaatgcgcggggcgcgaccctgtatgtgctggatgagccgactaccggg
ctgcatccacgggatgtggaccgcttgctcagccagttgaatcatctggtggacgcgggg
catacggtggttgtggtggagcatgagatgcgcgtggtggcgcagagtgattgggtgatt
gatatcgggccgggggcgggggatttgggggggaaggtggttgtcagtggtacgccgcag
aaagttgcgaaaagcaaggtgagccggactgcgccgtttctggctcgagagctggtctaa
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