KEGG   Pseudomonas azotoformans: AYR47_26470
Entry
AYR47_26470       CDS       T04879                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
pazo  Pseudomonas azotoformans
Brite
KEGG Orthology (KO) [BR:pazo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pazo03032]
    AYR47_26470
   03036 Chromosome and associated proteins [BR:pazo03036]
    AYR47_26470
   03400 DNA repair and recombination proteins [BR:pazo03400]
    AYR47_26470
DNA replication proteins [BR:pazo03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    AYR47_26470
Chromosome and associated proteins [BR:pazo03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    AYR47_26470
DNA repair and recombination proteins [BR:pazo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      AYR47_26470
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 Barstar
Other DBs
NCBI-ProteinID: AMN81638
UniProt: A0A127I462
LinkDB
Position
complement(5775675..5775947)
AA seq 90 aa
MNKSELIDAIAASADIPKAAAGRALDAVIESVTGALKAGDSVVLVGFGTFSVTDRPARTG
RNPQTGKALQIAAAKKPGFKAGKALKEAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaacaagtcggaactgattgatgctatcgctgcatccgctgatatcccgaaagctgct
gctggccgtgcgctggatgcagtaatcgaatccgtcactggcgctctgaaggccggcgac
tccgtggtcctggtaggcttcggtactttctctgtgactgaccgcccagctcgcactggc
cgtaacccacagactggcaaagcactgcagatcgctgctgccaagaaaccaggtttcaaa
gccggtaaagccctgaaagaagctgttaactaa

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