Paenibacillus azoreducens: PAJ34TS1_60540
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Entry
PAJ34TS1_60540 CDS
T11483
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
Organism
pazr Paenibacillus azoreducens
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
BFH65462
LinkDB
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Position
complement(6664827..6668243)
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AA seq
1138 aa
AA seq
DB search
MREMFQDISPIQDFTGNLVLEFIDYSLGEPKYTVDDAKERDVTYAAPLRVKVRLINKETG
EVKEQEVFMGDFPLMTETGTFIINGAERVIVSQLVRSPSVYFSTKVDKNGKKTYTATVIP
NRGAWLELETDAKDIMYVRIDRTRKIPVTVLLRALGFGSDAEILDLLGNDEYIRNTLDKD
NTDSTEKALIEIYERLRPGEPPTLDNAKSLLVARFFDPKRYDLANVGRYKINKKLHIKNR
LFNQRLAESLIDTQTGEIIAEAGQMVDRRLLDEIMPHLDTMVGHKTYHVANGVLDAVDIP
LQTIDIFSPIEDGKVVKVIANGNIDKSVKHITPADIISSISYFINLLHGIGNTDDIDHLG
NRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDANVITPQALINIRPVIASIKEFFGSS
QLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGFEVRDVHHSHYGRMCPIETPEGPNI
GLINSLSTFARINEYGFIEAPYRWVDPKTGVVTDHIDYLTADEEDNYVVAQANAKLNEDG
TFAEEMVIVRYNKQSDNILPMPSDRVDYMDVSPKQVVSVATALIPFLENDDSNRALMGSN
MQRQAVPLLVPKAPLVGTGMEHKSAKDSGVCIVSKHDGIVERSSADEIWVRRIETIDGKE
VKGDIVKHKLHKFMRSNQGTCINQRPIIKKGEIVKKGDILADGPSTEMGELALGRNVVVA
FMTWEGYNYEDAILLSEKLVKEDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALK
NLDERGIIRIGAEISAGDILVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHG
SDGIIVDVKVFTRENGDELPPGVNQLVRVYIAQKRKISEGDKMAGRHGNKGVVARILPEE
DMPFLPDGTPVQVVLNPLGVPSRMNIGQVLEVHLGFAAMQLGIHVATPVFDGASEYDVFD
TMEEAGMQRNGKTVLYDGRTGERFEREVTVGVMHMIKLAHMVDDKIHARSTGPYSLVTQQ
PLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKSDDVVGRVKTYESIVKGENVPEP
GVPESFKVLIKELQSLGMDVKILSGDEQEIEMKELDDEDETAGDKLSLNLEGAEVGAE
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgaaatgttccaggatatctcgccaattcaggattttacgggaaatttggtgctg
gagttcattgactacagtcttggtgaaccaaaatacaccgtcgatgacgcgaaggaacgc
gacgtaacgtatgcggcgcctttgcgggtgaaagtacggctcatcaacaaagaaaccgga
gaagtcaaagaacaggaagtattcatgggcgatttcccgctgatgacggagaccggtacg
tttattatcaatggcgcagaacgggtcattgtcagccagttggtacgctctcctagcgtc
tacttcagcacgaaagtcgataaaaacggcaagaagacatatactgcgacggtcattccg
aaccgcggtgcatggctggaactggagacggatgcgaaggacatcatgtatgtccgtatt
gaccgcacccgtaaaattccggttaccgttttgctgagagcgcttggtttcggcagcgac
gccgaaattttggacctgcttggcaacgacgaatatatccgcaatacgctggacaaagac
aataccgattctactgaaaaagcgctcattgagatatatgaacgccttcgtccgggcgaa
ccgcctacgctggataatgcgaaaagtctcctcgtagcgcgtttctttgatcctaaacga
tatgatttggccaatgtcggccgttataaaattaataaaaagcttcacattaagaaccgc
ctctttaaccaacgtcttgccgaatcgctgatcgacacccagacgggtgaaattatcgct
gaagccggacaaatggtggatcgccgtttgcttgatgagattatgcctcatctggatacg
atggttggtcacaaaacctatcacgttgctaacggtgtgctggatgcggtcgatattccg
ctgcaaactatcgacatattctcgccgatcgaagacgggaaagtcgttaaagttatcgcg
aacggcaacatcgataaatcggtgaagcatattacgcctgctgatattatttcctcgatc
agctactttattaatttgctgcatggcatcggcaacacggatgacattgaccatttgggc
aaccgtcgtctgcgttccgtaggcgaactgctgcaaaaccaattccgtatcgggctttcc
cgtatggaacgcgttgtacgcgaaagaatgtcgattcaggatgcgaacgtgattacgccg
caagcgctgatcaatatccgtcctgtaatcgcatcgattaaagaattcttcggaagttcc
cagctttcgcagtttatggaccaaacgaatccgcttgccgagctgacgcataaacgccgt
ttgtctgcactcggtccaggcggtttgacccgtgagcgtgcaggctttgaagtccgcgac
gtccaccacagtcactacggccggatgtgtccgatcgaaacgccggaaggtccgaacatc
ggtttgatcaactccttgtcaacatttgcccgtatcaacgagtatggcttcattgaagct
ccttaccgttgggtagatccgaagacgggtgtcgttaccgatcatatcgactacctgacg
gctgatgaagaagacaattacgttgttgcccaggcgaatgcgaagcttaatgaagacgga
acgtttgcggaagaaatggttatcgtccgttataacaaacagtccgacaacattttgccg
atgccgagcgatcgcgtcgattacatggacgtttctccaaaacaggttgtatccgttgcg
acggcgctcattccgttcctcgaaaacgatgactccaaccgcgcgttgatgggttcgaac
atgcagcgtcaagcagtgccgctccttgtgcctaaagctccgctggtcggaaccggcatg
gaacacaagtctgcgaaggattcgggcgtatgtatcgtttccaagcatgacggcattgtg
gaacgttcgagcgcggacgaaatctgggtgcgccggatcgaaaccattgacggcaaagag
gtcaagggcgatatcgttaaacataaattacacaaatttatgcgttctaaccaaggaaca
tgcattaaccagcgcccgatcattaaaaaaggcgaaattgtgaagaaaggtgacatcctg
gctgacggaccttccaccgagatgggcgaactcgccctgggccgcaacgtcgtcgttgcg
tttatgacctgggaaggctacaactacgaggatgcgatcctgctgagcgaaaagttggtt
aaagaggatgtgtacacttcgattcacatcgaagaatacgagtccgaagcgcgagatacc
aaacttggacctgaagaaatcacccgcgatattccaaacgtaggtgaagatgcgctcaag
aaccttgatgagcgcggcattatccgcatcggtgcggaaatcagcgccggcgacatcctg
gttggtaaagtaacgccaaaaggcgtgacggaactgactgcggaagaacgtctcctgcat
gcgattttcggcgagaaagcccgcgaagttcgcgatacatccctgcgcgtgccgcatggt
agcgacgggattatcgttgacgttaaagtatttacccgcgagaacggcgatgagctgcct
cctggcgtaaatcaactggttcgcgtctacatcgctcagaaacgcaaaatctctgagggt
gacaaaatggccggacgtcacggtaacaaaggggttgtggcccggatccttccggaagaa
gatatgccgttcctgccggacggtacgcctgtacaggtcgtgctgaatccgctcggcgtc
ccttcacggatgaacatcgggcaggtactcgaagtccatctgggctttgcggccatgcag
cttggcattcacgtggcaacgccggtattcgacggtgccagcgaatatgacgtgtttgac
acgatggaagaagcaggcatgcagcgcaacggtaaaaccgtgctgtatgacggacgtacc
ggggaaagatttgaacgtgaagttacggtcggcgtcatgcacatgattaaactggcgcac
atggttgacgataaaatccatgcccgttcgactggtccttactctctcgttacgcagcag
cctctgggtggtaaagctcagttcggcggccagcgcttcggtgagatggaagtgtgggcg
ctggaagcttacggcgcagcatatacgctgcaggaaatcctcaccgtcaaatccgacgac
gtggtcggccgggtgaagacgtacgaatccatcgtcaagggcgagaacgttccggaaccg
ggtgttcctgaatcgttcaaggtcttgatcaaagagcttcagtctctgggcatggatgtg
aagatcctgagcggcgacgagcaggaaatcgagatgaaagagctcgatgatgaagatgag
actgcaggcgataagctgagcctcaatctggaaggcgcggaagtcggagcggaataa
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