Paenibacillus azoreducens: PAJ34TS1_61020
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Entry
PAJ34TS1_61020 CDS
T11483
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pazr Paenibacillus azoreducens
Pathway
pazr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pazr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PAJ34TS1_61020 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pazr03400
]
PAJ34TS1_61020 (uvrA)
DNA repair and recombination proteins [BR:
pazr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PAJ34TS1_61020 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PAJ34TS1_61020 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
AAA_21
RsgA_GTPase
nSTAND3
AAA_22
AAA_25
BCA_ABC_TP_C
DnaJ_CXXCXGXG
nSTAND6
ATPase
NACHT
cobW
SLFN-g3_helicase
NB-ARC
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
BFH65510
LinkDB
All DBs
Position
complement(6724586..6727447)
Genome browser
AA seq
953 aa
AA seq
DB search
MANENIVIKGARAHNLKNIDITIPRDKFVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMEKPDVDSIDGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARIGHP
HCPEHGIEITSQTVEQMVDRIMSYPEKTRLQLMAPLVSGRKGEHKNLFADVAKQGFVRVR
VDGELRDLSESIELEKNKKHTIEVVVDRIVVKEGVETRLADSIETALKLSGGQLLVDIIG
QEELRFSSNFACSICGFSMEELSPRMFSFNSPFGACPECDGLGVKMIVDPELLIPDMEKS
IEEGAFLAWTGSTSNYYPQFLSSVCEHYDIPQNVPVSQLKKEDMDKLLYGTGSEKVRFRY
ENDFGQRKEANVVFEGIIPNLERRYRETASDGIREFIENFMSAKPCEVCKGHRLKKEVLA
VTVSGNNIADVTSLSIGDAMQLFDSLELSEKERSIAHLILKEINSRLGFLVNVGLQYLTL
SRAAGTLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNDRLIATLEHMRDLGNT
LIVVEHDEDTMLAADYIIDIGPGAGIHGGRVIAQGTPKQIMNDPNSLTGQYLSGRKFIPV
NPNRRKPDGRWLEIRGARENNLKNLNVKIPVGVFTAVTGVSGSGKSTLVNEILYKTLAKE
LNRAVKVRPGAHKEIRGLEHLEKVIDIDQSPIGRTPRSNPATYTGVFDDIRDIYAQTNEA
KIRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCKGKRYNRETLEVKYK
AKSIADVLEMTVEDATEFFKNIPKIHRKLQTLLDVGLGYITLGQPATTLSGGEAQRVKLA
SELYRRSTGKTMYILDEPTTGLHVDDIDRLLTVLHRLVDSGESVLVIEHNLDVIKTADYL
IDLGPEGGSGGGTIIATGTPEQLVKVDGSYTGKYLKPVLERDTARTEELKVGS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
ttggcgaatgaaaacatcgtgatcaaaggggcccgggctcataatttaaagaacatcgat
attaccattccgcgcgataaattcgttgtattgacgggccttagcggatcgggaaagtca
tcactggcttttgatacgatttatgccgaaggccagcgccgatacgtggagtcgttgtct
gcgtacgcgcgtcaatttctggggcaaatggagaagccggatgtggattcgatcgacgga
ctttccccggccatttctattgaccagaaaacgacaagccgcaacccccgctcaacggta
ggtacggtgacggaaatctacgactacctccgcctgctgtttgcgcggatcgggcatcct
cactgtccggagcacgggattgaaattacgtcccaaaccgtcgagcagatggtggaccgg
atcatgtcctatccggaaaaaacgagactccaactgatggcgcccctcgtttccgggcgc
aagggagagcataaaaacttgttcgcggacgtggccaagcaaggttttgttcgggtacgc
gtcgacggggaattgcgcgatctttccgaaagcatcgaacttgaaaaaaataaaaaacac
acgattgaagtggtcgtagaccggatcgtcgtcaaggagggcgtcgaaacccgcttggcg
gattccatcgaaacggcgcttaagctttccggcggacaactgctcgttgatatcatcggc
caggaggagctgcggttcagttccaattttgcctgctcgatttgcgggttcagtatggaa
gaactttcgccgcgcatgttttcattcaacagcccgttcggcgcctgcccggaatgcgac
ggtcttggcgtcaaaatgatcgtcgatccggaactgcttatcccggatatggaaaaatcc
attgaagaaggggctttcctggcttggacgggaagcacatccaactattatccgcagttc
ctgagttcggtatgcgagcattacgatattccgcagaatgttccggtcagccagctgaaa
aaagaggatatggacaagctgctgtacggaacaggcagcgagaaagtgcgtttccgttac
gaaaatgactttgggcagcggaaggaagcgaatgtcgtttttgaaggcatcatcccgaac
ctagagcgccgttaccgcgaaacggcttcggacggaatccgcgagtttatcgagaacttc
atgagcgccaagccatgcgaagtgtgcaaagggcatcgtttgaaaaaagaagtgctcgcg
gttacggtcagcggaaacaatattgccgatgtaaccagcttgtcgatcggcgatgcgatg
cagctgttcgattcgctggaactgagcgagaaggaacgctccatcgcccatttgattttg
aaggaaatcaatagccggctgggattccttgtgaacgtcggtttgcagtatctgacgctc
agccgtgcggcgggtacgctctccggcggcgaagctcaacggatcaggcttgccacccaa
atcggctccagcctgatgggcgtcctgtacattttggacgagccgagtatcggcctgcat
cagcgtgacaacgataggctgatcgcgacgctggagcatatgcgcgatcttggcaacacg
ctgatcgttgttgagcatgacgaggatacgatgctggcagccgattatatcatcgacatc
ggtccgggagcagggattcatggcggccgcgttattgcgcaaggaacaccgaagcaaatc
atgaacgatccgaactccttgaccgggcagtatttgagcggccggaagtttattcccgtc
aatccgaaccggagaaagccggatgggcgctggctggaaatccgcggtgcgcgcgagaat
aaccttaaaaacctgaacgtcaaaataccggtcggcgtttttacggcggtgacaggggtg
tccggttcaggaaaatcgacgctggttaacgagattttgtataaaacgctcgcaaaagaa
ctgaatagagccgtcaaagtgcgtccgggggcgcataaagaaatcaggggactcgagcat
ctggagaaggtcatcgatatcgaccagtctccgattggacgtacgccgcgttcgaaccct
gctacctataccggcgttttcgacgatatccgcgacatttacgcgcaaacgaacgaagca
aaaatccgcggctacaagaaaggccgtttcagtttcaacgtcaaaggcgggcgctgcgaa
gcctgccgcggggacggcatcatcaaaatcgaaatgcacttcctgccggatgtatacgtg
ccttgcgaagtctgcaaaggcaaacgatataaccgcgaaacgctggaggtcaaatataaa
gccaaaagcatcgccgatgtgctggagatgacggtggaggatgcaacggagtttttcaaa
aacattccgaaaatccaccggaagctgcagacgctgcttgacgtgggcctggggtacatc
acgctggggcagccggcaacgacgctttccggcggcgaagcccagcgcgtgaagctggct
tccgagctgtaccgccgcagtaccggcaaaacgatgtatatccttgacgaaccgacgaca
ggattgcatgtggacgatatcgaccgtttgttgaccgtcctgcaccggctggtggattcg
ggcgaatccgtgcttgtcatcgagcataatttggatgtcattaagacggcggattatttg
atcgacttggggccggaaggcggcagcggcggcggaacgatcatcgcgacaggaacgccg
gaacagcttgtcaaagtggacggctcctatacaggaaagtatctgaagcctgtgttggaa
cgggataccgcccgtaccgaggaattgaaggttggaagttaa
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