Paenibacillus azoreducens: PAJ34TS1_61030
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Entry
PAJ34TS1_61030 CDS
T11483
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pazr Paenibacillus azoreducens
Pathway
pazr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pazr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PAJ34TS1_61030 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pazr03400
]
PAJ34TS1_61030 (uvrB)
DNA repair and recombination proteins [BR:
pazr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PAJ34TS1_61030 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PAJ34TS1_61030 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UvrD-helicase
AAA_30
AAA_22
AAA_7
TrwB_AAD_bind
AAA_5
Motif
Other DBs
NCBI-ProteinID:
BFH65511
LinkDB
All DBs
Position
complement(6727660..6729651)
Genome browser
AA seq
663 aa
AA seq
DB search
MSDIVVSTRPFELLSEYKPQGDQPKAIAELVEGLEQGKQHQTLLGATGTGKTFTIAQTIA
KVNRPTLVIAHNKTLAAQLASEFKEFFPNNSVDYFVSYYDYYQPEAYIPSSDTYIEKDSS
INEEIDKLRHSATSSLFERRDVIIVASVSCIYGLGSPSEYSSLLLSLRVGMEKPRNQILS
RLVDIQYQRNDINFVRGTFRVRGDVIEIFPASQGEHAIRVEFFGDEIERITEIDVLTGEL
IGEREHVAIFPASHFVTKEETMRIALKNIERELEEQLEYFRSEGKLLEAQRLEQRTRYDI
EMMKEIGFCSGIENYSGPLTFRERGATPYTLLDYFPDDFLIVVDESHVTLPQIRAMYNGD
RARKTVLVDHGFRLPSALDNRPLQFEEFEEKVNQIIYVSATPGPYEMEHCDTMVEQIIRP
TGLLDPVIEVRPTEGQIDDLIGEIRERIDRDERVLVTTLTKKMAEDLTDYLKEIGIKVRY
LHSDIKTLERIAILRDLRLGVFHVLVGINLLREGLDLPEVSLVAILDADKEGFLRSERSL
IQTIGRAARNSEGFVIMYGDHITESMDKAIKETARRRGLQIAYNEEHGITPQTIRKKVRD
VIEATKVAESKAEYLTGASGKMSKKERQSVIQRLEAEMKEAAKNLQFERAAELRDALLEL
KAE
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatattgtcgtaagtaccagaccgtttgagcttttatccgaatataagccgcag
ggcgaccagcccaaggcgatagcggaactggtggaagggcttgaacaggggaaacagcat
cagacattgcttggagcgaccggaacggggaagacgtttacgattgcgcagacgattgcc
aaggtaaaccggccgacgctggtaattgcccacaataaaactttggcagcccagctggcg
agcgaattcaaggagttttttccgaataattcggtagattactttgtcagctattatgat
tattatcaacccgaagcgtatatcccctcttccgatacctatattgagaaggattcgagc
attaatgaggaaatagacaaactacggcattccgcgaccagttcattgttcgagcggcgc
gacgtgattatcgtagccagcgtatcttgtatttacggtctcggttcgccttccgaatac
tcgagcttgctgctgtcgctgcgcgtaggcatggagaagccgcgcaaccagattctatcg
cggcttgtggacattcagtaccagcgtaatgatatcaatttcgtccgcggcacattccgc
gtccgcggcgacgtcatcgagatctttccggcttcgcaaggcgagcacgccatccgcgtc
gaatttttcggggatgaaattgagcgaatcacggaaatcgacgtgctcacaggcgaattg
atcggcgaacgcgaacacgtggctatttttccggcctcgcacttcgtcacgaaagaagaa
acgatgcggatcgccctgaaaaatatcgaacgcgagctggaagagcagctggaatatttc
cgctccgagggcaagctgctggaagctcaacgtctggaacagcgtacccgctatgacatc
gagatgatgaaggaaatcggtttttgttccgggatcgagaactactccggtccgctgacc
ttccgggaacgcggagcaacgccgtatacgctgctggattattttccggacgactttttg
attgtggtggacgaatcccatgtgacgctgccgcagatccgcgcgatgtacaatggcgac
cgggcccggaaaacggtcctggtggatcatggtttccgtcttccttcggctttggataac
cggcccttgcaattcgaggaattcgaagagaaggttaaccagatcatttatgtgtcggca
acgcccggcccgtatgaaatggaacactgcgatacgatggtcgagcagattatccggccg
accggactgcttgatccggtgattgaggttcgccctacggaaggccagatcgacgatttg
atcggtgaaatccgcgaacggatcgatcgggatgaacgcgtgctggtgacgacccttacg
aagaagatggcggaggatttgaccgattacctgaaggaaatcggcattaaggtccggtac
cttcactcggatatcaaaacgctcgagcggatagccatcctgcgcgatctccgccttggc
gtgttccatgtgttggtcggaatcaatctgctgcgggaaggtttggacctgcctgaagtg
tcgctggttgcgattttggatgcggataaggaaggtttcttgcgttccgaacgttccctg
atccaaacgattggccgtgcggctcggaactcggaaggtttcgtcattatgtacggcgac
catattaccgaatcgatggataaagcgatcaaggaaacggcccgtcgccgcgggctgcag
attgcgtataatgaggaacacggcattacgcctcaaactatccgcaagaaggtgcgcgat
gtgatcgaagcgaccaaggttgccgaatcgaaagcggagtatctgacgggagcttccggc
aaaatgtcgaagaaggagcgccagtcggtcatccagcgcctggaggcggaaatgaaggaa
gcggcgaaaaatttgcagttcgaacgcgccgcggagcttcgcgacgccttgctggaactg
aaggctgaataa
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