Paraburkholderia sp. 22B1P: PBP221_00510
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Entry
PBP221_00510 CDS
T10680
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pazz Paraburkholderia sp. 22B1P
Pathway
pazz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pazz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PBP221_00510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pazz03400
]
PBP221_00510
Enzymes [BR:
pazz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PBP221_00510
DNA repair and recombination proteins [BR:
pazz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PBP221_00510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
BEU19911
LinkDB
All DBs
Position
1:57541..58323
Genome browser
AA seq
260 aa
AA seq
DB search
MLRVITANLNGIRSAAKKGFFEWFGEQKADVVCVQEIKCSQDDMTPEFLAPHGFTGYFQH
AVKKGYSGAGLYTRHEPDEVVIGFGSEEFDPEGRYVEARFGNLSVISVYVPSGSSGDERQ
QAKYRFMDEFMPHLAELSKEREVIVCGDVNIVHKEIDIKNWKGNQKNSGCLPEERAWLTK
LFDDVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQITTQGIAATAKRVDVFRD
IKFSDHAPVTVDYAHKIAKK
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtgtgatcaccgccaacctgaacggcatccgttcggcggccaagaagggattt
ttcgagtggttcggcgagcagaaggccgacgtcgtgtgcgtgcaggaaatcaaatgctcg
caggacgacatgacgcctgaatttctcgcgccgcacggtttcaccggctatttccagcat
gcggtgaagaagggttatagcggcgcgggtctctatacgcgtcacgaaccggatgaagtc
gtgatcggtttcggcagcgaagagttcgatccggaagggcgttacgtggaagcgcgtttc
ggcaatctctcggtgatttcggtgtatgtgccgtcgggttcgagcggcgacgaacgccag
caggcgaagtaccgcttcatggacgagttcatgccgcatctcgcggagttgtcgaaagag
cgcgaagtgatcgtgtgcggcgacgtgaacatcgtgcacaaggaaatcgacatcaagaac
tggaagggcaaccagaagaactcgggctgcctgccggaagagcgcgcgtggctcacgaag
ctgttcgacgacgttggctacgtggacgtgttccgcacgctcgatcagcggcccgagcaa
tatacgtggtggagcaatcgcggccaggcgtatgcgaagaacgtggggtggcgtatcgac
taccagatcacgacgcagggcattgcggcgacggcgaagcgcgtcgatgtgttccgcgac
atcaagttcagcgatcacgcgcccgtgaccgtcgactacgcgcacaagatcgcgaagaaa
taa
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