Paraburkholderia sp. 22B1P: PBP221_00700
Help
Entry
PBP221_00700 CDS
T10680
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pazz Paraburkholderia sp. 22B1P
Pathway
pazz00300
Lysine biosynthesis
pazz00470
D-Amino acid metabolism
pazz01100
Metabolic pathways
pazz01110
Biosynthesis of secondary metabolites
pazz01120
Microbial metabolism in diverse environments
pazz01230
Biosynthesis of amino acids
Module
pazz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pazz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PBP221_00700 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PBP221_00700 (dapF)
Enzymes [BR:
pazz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PBP221_00700 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
CitF
Hexokinase_2
Motif
Other DBs
NCBI-ProteinID:
BEU19930
LinkDB
All DBs
Position
1:complement(77353..78213)
Genome browser
AA seq
286 aa
AA seq
DB search
MKLKFTKMHGAGNDFVVLDGYTQPLNLTEAQVRALANRHFGVGADQLLVVEKPTVEGVDF
RYRIFNCDGGEVEHCGNGARCFVKFVRDTHLTDKQSVRVQVQKGVITLTMQANGEVVVDM
GAPVFEPAQVPFDASGLDARREGNDALYPLDVNGATRWISVVSMGNPHAVQIVDDVEAFP
VLVDGPVIENHPRFPQRVNAGFMQIVSRSEIKLRVYERGAGETLACGTGACAAVAAGIRR
GLLDAPVKVHTHGGALTITWNGESASPLMMAGPAATVFEGEIELAD
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaattcaccaagatgcacggcgcgggcaacgacttcgtcgtgctcgacggc
tacacgcaaccgctcaacctgacggaggcgcaggtgcgcgcgctcgccaaccggcatttc
ggcgtcggcgcggaccagttgctggtggtcgagaagccgaccgtcgaaggcgtcgatttc
agataccgcatcttcaattgcgatggcggcgaggtcgagcattgcggcaacggcgcgcga
tgcttcgttaagttcgtgcgcgacacgcacctcaccgacaagcagagcgtgcgtgtgcag
gtccagaaaggcgtgattacgctgaccatgcaggcaaacggcgaagtcgtcgtcgacatg
ggcgcgcccgtgttcgagccggctcaggtgccgttcgacgcaagcggactcgatgcgcgc
cgcgaaggcaacgacgcgctctatccgctcgacgtcaacggcgcgacgcgctggatatct
gtggtgtcgatgggcaatccgcacgcggtgcagatcgtggacgacgtcgaggcgttcccc
gtgctggtcgacggtcccgtgatcgaaaaccatccgcgcttcccgcagcgggtcaatgcg
gggttcatgcagatcgtcagccgcagcgagatcaagctgcgcgtgtacgagcgcggtgcg
ggcgaaacgctggcgtgcggcacgggcgcctgcgcggccgtcgcggcaggcatccgtcgc
ggcttgctggacgcgcccgtcaaggtgcacacgcacggcggcgcgctgaccatcacgtgg
aacggagaatccgcgtcgccgctgatgatggcggggccggccgccactgtgttcgaaggc
gaaatagaactggccgactga
DBGET
integrated database retrieval system