Paraburkholderia sp. 22B1P: PBP221_03330
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Entry
PBP221_03330 CDS
T10680
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pazz Paraburkholderia sp. 22B1P
Pathway
pazz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pazz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PBP221_03330 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pazz03400
]
PBP221_03330 (mutM)
Enzymes [BR:
pazz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PBP221_03330 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PBP221_03330 (mutM)
DNA repair and recombination proteins [BR:
pazz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PBP221_03330 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
RNHCP
Motif
Other DBs
NCBI-ProteinID:
BEU20193
LinkDB
All DBs
Position
1:375325..376155
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AA seq
276 aa
AA seq
DB search
MPELPEVEVTRRGIEPYVAGHRVKRVEVRTPMLRWPIPPGFARLLQGRLVHTVARRGKYL
LFEIDEGWFIVHLGMTGTLRVLRNVPHPPAAAKHDHVDWVFDDFILRFRDPRRFGAVLWH
TRSAGDVLEHPLLADLGVEPFAPSFSGALLHRKTRGRKISVKQALLAGDIVVGVGNIYAS
ESLFRAGIRPTTAAGRISLVRYGLLADAVRVTLAAAIEKGGSTLRDFVGSNGESGYFQLD
YFVYDRAGLPCRVCGTPIKQIVQGQRSTYYCPTCQR
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttaccagaagtcgaggttacccgacgcggaatcgaaccgtacgtggcggga
caccgtgtcaagcgcgtcgaagtgcgcacgcccatgctgcgctggccgattccgccaggt
tttgcccgtctgctgcagggccggctcgttcacacggtggcgcggcgcggcaagtatctg
ctgttcgagatcgacgaaggctggttcatcgtgcatctcggcatgacggggacgctcagg
gtcctgcgcaacgtgccccatccgccggccgctgcgaagcatgatcacgtcgactgggtt
ttcgacgacttcattttgcgcttccgcgatccgcgccgctttggcgctgtgttatggcat
acgcgctcggcgggcgacgttctcgaacatccgctgctggcggatctcggagtcgagccg
ttcgcaccgtcgttctccggcgcgctgctgcatcgaaagacgcgcggacggaagatttcg
gtgaagcaggcgctgctcgcaggcgatatcgtcgtcggcgtgggcaacatttacgcatct
gaaagcctctttcgcgcgggtatccggccgaccacggctgccgggcgcatctcgctcgta
cgttacggtctgcttgcagacgccgtgcgcgtgacgcttgccgccgcgatcgagaagggc
ggcagcacgttgcgcgatttcgtcggcagcaacggcgagagcggatacttccagctcgac
tatttcgtctatgatcgcgcgggtctgccatgccgcgtgtgcggcacgccgatcaaacag
atcgtgcaggggcaacgctccacttactactgtccgacctgtcagcgctga
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