Paraburkholderia sp. 22B1P: PBP221_07280
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Entry
PBP221_07280 CDS
T10680
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pazz Paraburkholderia sp. 22B1P
Pathway
pazz03030
DNA replication
pazz03430
Mismatch repair
pazz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pazz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PBP221_07280
03430 Mismatch repair
PBP221_07280
03440 Homologous recombination
PBP221_07280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pazz03032
]
PBP221_07280
03400 DNA repair and recombination proteins [BR:
pazz03400
]
PBP221_07280
Enzymes [BR:
pazz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PBP221_07280
DNA replication proteins [BR:
pazz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PBP221_07280
DNA repair and recombination proteins [BR:
pazz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PBP221_07280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
ATP-synt_DE_N
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BEU20588
LinkDB
All DBs
Position
1:823161..824339
Genome browser
AA seq
392 aa
AA seq
DB search
MSELLLSEPALDVPIVFVDLETTGGSVGQHRITEIGVVELGPDGASTWTTLVDPGQPIPP
FIQQLTGITDAMVRGAPTFESIAADLFARLDGKLFIAHNANFDRGFLRSEFQRVGFAFNP
DMLCTVRLSRALFPAEKRHGLDALVERHALVPSDRHRALADADLLWQFWQRLHGLVPVEV
LRAQIDKTMRRFRLAGDITEDLLDTAPAGCGVYAFYGENDAPLYVGRSVRVRQRLRTHLT
GERRSSKELKLAQQVRRVEWRGTGGEIGALLAEAQMIAALRPPHNRVPRVSRADPVDAPW
PYDGAIAFEERDTVEGARAFHVVDRWRYLGHAPSLAEAATLLAASVPGAFELSTWRVLQS
HLARGLSVLPLSRQPTEPAASAIPAAAPVDAA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaactgcttctgtctgaaccggccctcgatgtgccgatcgtgtttgtcgacctg
gaaacgacgggtggttccgtcggccaacaccggatcacggaaatcggcgtcgtcgagctg
gggccggatggcgcgtccacatggaccacgctcgtcgaccctggtcagcccattccgcct
ttcatccagcagttgacaggcatcaccgacgccatggtgcgcggcgcgccgaccttcgag
tcgatcgccgccgatctttttgcgcggctcgacggcaagctgttcattgcgcacaacgcg
aacttcgaccgcggatttttgcgcagcgagttccagcgcgtgggcttcgcgttcaatccc
gatatgttgtgcaccgtgcgcctgtcgcgcgcgctgtttcccgcagaaaagcgccacggc
ctcgacgcgctggtggaacggcatgcgctggttccgtcggaccggcaccgcgcgctcgcc
gacgccgatctgctctggcagttctggcagcggctgcacggtctcgtccctgtcgaggtt
ctgcgtgcgcaaatcgacaagaccatgcgccggttccggctcgcgggcgatatcacggaa
gatctgctcgataccgcgcccgccggctgcggcgtctacgcgttctatggcgagaacgac
gcgccgttgtacgtcggcagaagcgtgcgtgtgcgccagcgtctgcgcacgcatctgacg
ggagagcgccgttcgtcgaaagagttgaagctggcgcagcaggtacgccgcgtcgagtgg
cgcggcacgggcggggagatcggcgcgctgcttgccgaagcgcagatgatcgcggcactc
cgcccgccgcataaccgcgtgccgcgggtgagccgcgccgatcccgtcgacgcgccctgg
ccttacgacggcgcgatcgcgttcgaggaacgtgacacggtcgagggcgcgcgcgctttc
cacgtcgtggatcgatggcgctatcttggacacgcaccttcgctggccgaggccgcgacc
ctgctcgcggcaagcgtgcccggcgcgttcgagttgtcgacgtggcgcgttttgcagtcg
catctcgcgcgcggcctgagtgtgctgccgctcagccgccagcccacggagcccgctgca
agcgccatccccgcagcggctcccgtcgacgcagcctaa
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