Paraburkholderia sp. 22B1P: PBP221_08850
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Entry
PBP221_08850 CDS
T10680
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
pazz Paraburkholderia sp. 22B1P
Brite
KEGG Orthology (KO) [BR:
pazz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pazz03009
]
PBP221_08850
Enzymes [BR:
pazz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
PBP221_08850
Ribosome biogenesis [BR:
pazz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PBP221_08850
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BEU20745
LinkDB
All DBs
Position
1:999375..1000427
Genome browser
AA seq
350 aa
AA seq
DB search
MKELGKISQKSVTSPVASDQVSMIEIDDSAAGQRIDNFLLRVCKGVPKSHIYRILRSGEV
RVNKGRVDAQYRLAFGDLVRVPPIRVAKADEAVHAPVPSAHFEILFEDEHMLVIDKPAGV
AVHGGSGVAFGVIEQLRAARPQAKFLELVHRLDRETSGVLMLAKKRAALVNLHEQIRENR
MDKRYYACVHGEWASDWGRRRAVKEPLHKYLLPDGERRVRVQPDGLPSHTIFNLIDRWPG
YALLEAELKTGRTHQIRVHLAHLGLPIVGDAKYGDFALNKALARANAQPGLKRMFLHAYR
LKLTHPATGDTIQFEAPLPADCKRFIAQLAGMANAGTPHEPSQTETKTHG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagttaggcaaaatatcccagaaatcggtgacgagccccgttgcaagcgatcag
gtgtcgatgatcgaaatcgacgacagcgcggccggtcagcggatcgacaacttcctgttg
cgcgtctgtaagggcgtgccgaaaagtcatatttatcggattctgcgcagcggcgaagtg
cgtgtgaacaagggccgggtggacgcgcagtaccgtctcgccttcggcgatctggtgcgc
gtgccgcccattcgggtcgccaaggcggacgaggcggtgcacgcgcccgtaccctccgcg
catttcgagatcctgttcgaagacgagcacatgctcgtgatcgacaagccggccggcgtc
gccgtgcatggcggcagcggggtcgcgttcggcgtgatcgaacagttgcgggcggcgcgt
ccccaggcgaagtttctggaactggtgcaccggctggatcgcgagacgtcgggcgtgctg
atgctcgcgaaaaagcgcgcggcgctcgtgaatctgcacgagcagatccgcgaaaaccgg
atggacaagcgctattacgcgtgcgtgcacggcgaatgggcgagcgactggggccgccgg
cgtgccgtgaaggagccgctgcacaaatatctgctgccggacggcgagcggcgtgtgcgc
gtgcagccggacgggttgccatcgcacactattttcaatctcatcgaccgctggcccggt
tacgcgttgctcgaagcggaactgaaaacggggcggacccatcagattcgtgttcatctg
gcgcatctggggttgccgatcgttggcgacgccaaatacggcgatttcgcgctgaacaag
gcgctggctcgcgcgaacgcgcagccggggctcaaacggatgttcttgcacgcataccgg
cttaagctgacgcacccggcaacgggcgacacgatacagttcgaggcgccactgccggca
gactgcaagcggttcattgcgcaacttgccgggatggcgaacgccggaacgccgcacgaa
ccatcacaaaccgagacgaaaacgcatggctag
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