KEGG   Paraburkholderia sp. 22B1P: PBP221_16860
Entry
PBP221_16860      CDS       T10680                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
pazz  Paraburkholderia sp. 22B1P
Brite
KEGG Orthology (KO) [BR:pazz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pazz03032]
    PBP221_16860
   03036 Chromosome and associated proteins [BR:pazz03036]
    PBP221_16860
   03400 DNA repair and recombination proteins [BR:pazz03400]
    PBP221_16860
DNA replication proteins [BR:pazz03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    PBP221_16860
Chromosome and associated proteins [BR:pazz03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    PBP221_16860
DNA repair and recombination proteins [BR:pazz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      PBP221_16860
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 UBA_HYPK HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: BEU21546
LinkDB
Position
1:complement(1938671..1938976)
AA seq 101 aa
MIAQLHSRGLGMNKTELIDHIAQQADISKAAAGRALDAVIGGVKGTLKKGGSVTLVGFGT
FAVGKRTARTGRNPRTGAAIKIKAAKVPKFRPGKALKDALN
NT seq 306 nt   +upstreamnt  +downstreamnt
atgattgcccaactacattctcgggggcttggaatgaataaaacggaattgatcgatcac
atcgcgcagcaagccgacatttcgaaagcggcagcaggtcgcgcgttggatgccgtgatc
ggtggcgtcaaaggcacgttgaaaaaaggtggttcggtgacgctggtcggcttcggcacg
ttcgccgttggcaagcgcacggcacgcacgggccgcaatccgcgcacgggcgcagcaatc
aagatcaaggcagccaaggttcctaaatttaggcctggtaaagcgctaaaggatgcgtta
aactaa

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