Paraburkholderia sp. 22B1P: PBP221_17830
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Entry
PBP221_17830 CDS
T10680
Name
(GenBank) glycosyl hydrolase family 28 protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pazz Paraburkholderia sp. 22B1P
Pathway
pazz00040
Pentose and glucuronate interconversions
pazz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pazz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PBP221_17830
Enzymes [BR:
pazz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
PBP221_17830
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
BEU21643
LinkDB
All DBs
Position
1:complement(2024639..2026588)
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AA seq
649 aa
AA seq
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MDTRIIEHLASTPTRAARTTSVWIASLSTALLLAACGGGSGVAASDVAGGNVNNNGAVAP
AAASSASDASATTPDQPASGATPASDPGGQPTPGFQVGTTTFDAALPPEPTLPTSTQICQ
SLDAALTAQPNGLLPDSADAANTAPDTARIQAALTACTNAASTGLSTNKVVRLRSGANGA
NAFLSGPLNLPSGVTLWIDERVTLFASRDPRQFDKTPGTASCGLITASDNGCNALMTAAK
TSNSAVVGDGTIDGSGGRQLVSSVRDDPNLLKRADGSAMSWWDIGYEANVVQNKSQNNPR
LIQINNGSNFTLYRVTLQNAPKFHVVPSGVQGFTAWGVKIYTPTAAYEAMNNYKGVPYST
VNAKNTDGIDPASSGQITSNPGNPRKLTGDASNMLIAYTSIRTGDDNMAIKGGTAPVNGR
TYNITVAHSHFYEGHGMSIGSESAGSDNGVANADVTPVGGVYPSVSNVNVYDLTIDGADN
GLRIKSDWSRGGLVSNIRYSNVCIRTGNQTSDPEALIFSPYYSPTKSLGLYPNLQSIVLD
GIRIVNASKYTFQGFNSASPVLLGSGWSAGTIGFPTPPVVNPLLISLNNVVADVAPLNMT
VADAQFSIGEGGTTLPLQPGSGVTLMRAAGTQVSPVDCSKAFVPFPAKS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggacacccgtatcatcgagcatcttgcatcgacgccgacacgagccgcacggacgacc
tcggtgtggatcgcgtcgctttcgacggcgctgcttctcgcggcctgcggcggcgggtcg
ggggtggcagcgtcggacgtagcgggcggcaacgtgaacaacaacggagcggttgcgccc
gctgcggcttccagcgcaagcgacgccagcgcgaccacacccgatcagcctgcctcaggc
gccacgccagccagcgacccaggcggccagcccacgccaggcttccaggttggcacgacg
accttcgacgccgcgctgccgcccgaaccgaccttaccgacgtccacgcaaatctgtcag
tcgctggacgcggcactgacggcgcaaccgaatggcctgctgcccgatagcgccgacgca
gccaacacggcccccgacaccgcacgcatccaggccgcgctgacggcatgcacgaacgcc
gcgagcacaggcctttcgacaaacaaagtggtgcgtctgcggtctggcgcgaacggggcg
aacgcgttcctgtccggcccgctgaatctgccgagcggcgtcacgttatggatcgacgaa
cgcgtgaccttgttcgcatcgcgcgatccgcgccagttcgacaagaccccaggcacggcg
agttgcggcctgattacagccagcgacaacggctgcaacgcgctgatgacagccgccaaa
acgagcaacagcgcggtcgtcggcgatggcacgatcgacgggagcggcggcaggcagctc
gtcagcagcgtgcgcgacgatccgaatctgctcaagcgcgccgacggctccgcgatgagc
tggtgggacatcggctatgaggcgaacgtcgtgcagaacaagtcgcagaacaacccgcgt
ctcatccagatcaacaatggcagcaatttcacgctgtatcgcgtgacgttgcagaacgcg
ccgaagtttcacgtcgtgccgagcggtgtgcagggcttcactgcatggggcgtcaagatc
tacacgccgacggccgcctacgaggcgatgaacaactacaaaggcgtgccctacagcacc
gtcaacgcgaagaacaccgacggcatcgacccggcgagttccggtcagatcaccagcaat
ccgggcaaccctcgcaagctgacgggcgacgcgagcaacatgctgatcgcgtacacatcg
atccgcacaggcgacgacaacatggcgatcaaaggcggcactgcgcccgtcaacggtcgc
acgtacaacatcacggtcgcgcacagccacttttacgaaggacatgggatgtcgatcggc
agcgagtcggcggggtcggacaacggtgtggccaatgcggacgtgacgcccgttggcggc
gtgtatccgagcgtgagcaacgtgaacgtctatgacctgaccatcgacggcgccgacaac
ggtttgcgcatcaagtccgactggagccgcggcggcctcgtctcgaacatccgttattcg
aatgtgtgcattcgcacgggcaaccagacgtcggacccggaggcgctgattttctcgccg
tactacagtcccacgaaaagcctcgggctgtatccgaacctccaaagtatcgtgctcgac
ggcatacgcatcgtgaacgcatcgaagtacacgttccagggcttcaattcggcgagtccc
gttctgcttgggtcgggctggtcggcgggaacgattgggttcccgacaccgcccgtggtc
aatcccttgctgatctcgctgaacaacgtcgtcgcggatgtggcgccgctgaatatgacc
gttgcggacgcacaattctcgattggcgaaggcggcacgacgttgccgttgcagcccggc
agcggcgtgacgttgatgcgcgcggcgggcacgcaagtgtcgcccgtcgattgcagcaag
gcgttcgtgccgttcccggcgaagtcctga
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