Paraburkholderia sp. 22B1P: PBP221_20310
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Entry
PBP221_20310 CDS
T10680
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pazz Paraburkholderia sp. 22B1P
Pathway
pazz03440
Homologous recombination
Brite
Enzymes [BR:
pazz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PBP221_20310 (recC)
DNA repair and recombination proteins [BR:
pazz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PBP221_20310 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BEU21891
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All DBs
Position
1:complement(2330221..2333589)
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AA seq
1122 aa
AA seq
DB search
MLQLFYSNRYDVLVGALLDGLGATPSSPWTAQPVIVPSAAVRRRLELDIAARQGVCANIQ
FSYLAQWLWTQIGGVIKDVPKSSPFSPDRLVWRCYRLLGDADEARPWNGSPRLRSYLDAA
DAPMRYELARRVATVLDHYLTYRPEWLLQWQKGGSIFASGAADDSGPRLTGASAAVREDE
RWQGALWRTLLGEVAGDAHSADAATPPAYRFLDEVRSLDLDAIARAEWPESVSVFALPTM
PPLHIALLRELSRWIDVRVYAMNPCREFWFDIVSVGRVEALDAAGQLDYQEVGHPLLAEW
ARQTQAQLHMLHELTESAASSEASYFAENAAPTWLAAVQNGMLDLRDERELDTQPEERGI
EVHVCHSLARQLEVLHDRLLGWFDEFDDLQPSDVLVTLPDLGAAGPLIDAVFGTAPSGDT
RRIPYRITGLPPSQANPVARVLLDWLALPERNVGAPELIEWLRVDAIAARYGIDAAALED
IQEWLAAAGARRGLAPVPPADNAIPVARHTFADALTRLFLGYAMPEGGQPVDAWLPVEGA
DGSDAELLGRLASFVDDVDAFARRCADDMTPVEWTQLLLEVLGRCFDGGVDFADSVSTVR
DAVDAMSDAMRAGAGESALPAAVVRTALSEALDDPARGGVPWGSVTFSSLTSLRGLPFRI
VCMLGMDDGVLPSLARADEFDLMAAFGKAGDRQRRDDERNLFLDLLLAAQDRLLIAYTGR
SIRDNAPLPPAALVDELLDHLARVSSAEDASPAELDSARRAFIVEHPLQPFASDYFNAKS
GLFTYDTDRAELAALLAAPSGVASAPFFDAPLPAVLNEPVPFDDFQRFWRHPARALLRDR
LGIVLSDAQGELLDMEPFELDFAGRDALAERLLPALLDTDFDSAAFERVQRVAEASPELP
GGATGAVWRTRELSALRGLADRVRREVASGVTRLPFSLDIDARWPDTGDIALFGPHDSTL
RKTSEGPLQLQGTLNLLTPTGQVVFRYARPTARDYLSAWLSHLVYCAALPDGPRRTVWHA
SGESFELAPVEKPLDQLAPLAALFSAGRALPLRFFPKSAWAKISDGDSAAQGAWISDRVR
GESDDAALRIAFRGTTLTLDEPFGTLAAIVFKPLVAHLRNAS
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgctccagcttttctattcgaaccggtacgatgtcctcgtcggcgcgttgctcgacgga
ctcggtgccacgccttccagtccatggacggcgcaacctgtgatcgtgccgagcgcggcc
gtacggaggcggctggaactcgatatcgccgcgcgtcagggcgtgtgcgcgaacatccag
ttcagttacctggcgcagtggttgtggacgcagatcggcggcgtcatcaaggacgtgccg
aaaagttcgcctttctcgccggaccggctggtgtggcgctgctaccgtctgctcggcgat
gccgatgaagcgcggccgtggaatgggtcgccgcgcctgcgcagttacctcgatgccgcc
gacgcgccgatgcgctacgaactcgcgcgccgcgttgcgaccgtgctcgaccactatctg
acctatcgtcccgaatggctgttgcaatggcagaagggcggttcgatcttcgcaagcggc
gccgcggacgactccggtccgcgtctgacgggcgcgagcgccgcggtgcgcgaggacgag
cgctggcagggcgcgttgtggcgcacgctgctgggcgaggtcgcaggcgacgcgcattcg
gcggacgccgccacgccgcctgcctatcgctttctcgacgaagtgcgctcgctcgatctc
gacgcgatcgcccgcgccgagtggcccgagtccgtcagcgtgttcgcgttgccgaccatg
ccgcctttgcatatcgcgctgctgcgcgagctgtcgcgctggatcgatgtgcgggtgtac
gcgatgaacccgtgccgcgagttctggttcgacatcgtcagcgtggggcgtgtcgaagcg
ctcgatgcggcgggtcagctcgactatcaggaagtcggccatccgctgctggccgaatgg
gctcgccagacgcaggcgcagctccatatgctgcacgaactgacggaaagcgcggcctcg
tccgaagcctcgtatttcgccgaaaacgccgcgccgacctggctcgccgccgtgcagaac
ggcatgctcgatctgcgcgacgagcgcgagctcgacacgcagcccgaggagcgcggtatc
gaagtgcacgtgtgccatagtctcgcgcgccagctcgaagtgctgcacgaccgcctgctg
ggctggttcgacgagttcgacgatctgcagccttctgacgtgttggtcacgttgcccgat
ctcggcgcggccggcccgctgatcgacgctgtgttcggcaccgcgccctcgggcgacacg
cgccgcattccgtatcggatcaccggtttgccgccttcgcaggcgaatcccgtggcgcgc
gtgctgctcgactggctcgcgttgcccgagcgcaatgtcggcgcgccggagctgatcgaa
tggctgcgtgtcgacgcgatcgccgcccgctacggcatcgacgcggcggcgctagaagac
attcaggagtggctcgcggcagcgggcgcgcggcgcggtctcgcgcccgtgccgcctgcc
gacaacgcgattcctgtcgcgcgccacacatttgccgacgcgctcacgcggcttttcctc
ggctacgcgatgcccgaaggcggccagccggtcgatgcctggctgcccgtcgaaggcgcg
gacggctcggatgcggaactgctcgggcgcctcgcgagtttcgtcgacgacgtcgatgcg
ttcgcgcgccgttgcgccgacgacatgacgcccgtcgagtggacgcagttgctgctcgaa
gtgctgggccgctgcttcgatggcggcgtcgatttcgcggacagcgtgtccaccgtgcgc
gatgccgtcgatgccatgagcgatgccatgcgcgcaggcgcgggcgagtctgcgttgccg
gcggccgtggtgcgcacggcgctgtccgaagcgctcgacgacccggcgcgcggcggcgtg
ccgtggggcagcgtcacgttctcgtcgctgacgagcctgcgtggcttgccgttcagaatt
gtctgcatgctgggcatggacgacggcgtattgcctagccttgcgcgcgccgacgagttc
gacctgatggcggcgttcggcaaggcgggcgatcgccagcggcgcgacgacgagcgcaac
ctgttcctcgatctgctgctcgctgcgcaagaccgtctgctgatcgcctacaccgggcgc
agcattcgcgacaatgcgccgttgccgccagccgcgctcgtcgatgaactgctcgatcac
ctcgcgcgtgtttcgtccgcagaggatgcgtcgccggccgaactcgattcggcgcggcgc
gcgttcattgtcgagcatccgttgcagcctttcgcgtccgattacttcaacgcgaagagc
ggcctgttcacctacgacaccgaccgcgcggaactggccgcgctgctcgccgcgccgtca
ggcgtggcatccgcgccattcttcgatgcgccgttgcccgccgtgctgaacgagcccgtg
ccgttcgacgacttccagcgtttctggcgacaccccgcgcgcgccttgctgcgcgatcgc
ctcggcatcgtgctttccgacgcgcagggcgagttgctcgacatggagccgttcgaactc
gacttcgcgggccgcgatgcattggccgagcgtctgttacccgcactgctcgatacggac
ttcgacagcgcggcgttcgagcgggtgcagcgcgtcgcggaagcaagccccgagttgccg
ggcggcgcgacgggcgcggtatggcgcacccgcgaactgtcggcgctgcgtggccttgcc
gaccgcgtgcggcgcgaagtggcgtcgggcgtcacgcgcctgccgttctcgctcgacatc
gacgcgcgctggcccgacaccggcgacatcgcgctgttcggtcctcatgattcaacattg
cgcaaaacatcggaaggtccgttgcaactgcaaggcacactcaatctgctgacgccgacg
gggcaggtcgtgttccgttatgcgcgtcccacggcgcgcgactatctgtccgcgtggctg
tcgcatctcgtctattgcgcggcgttgcccgacggtccacgccgtaccgtttggcatgca
agcggcgagtcgttcgaactcgcgcccgtcgaaaaaccgttggatcaactcgcgccgctt
gccgcattgttcagcgcagggcgcgcgcttccgctgcgcttttttccgaaaagcgcatgg
gcaaagatcagcgatggcgattccgccgcgcaaggtgcatggatcagcgaccgcgtgcgg
ggcgagtccgatgacgccgcgttgcgcatcgcgtttcgcggcacgacgctgacgctcgac
gagccgttcggcacacttgccgcgatcgtattcaagccgctggtcgcgcatttgaggaac
gcatcatga
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