Paraburkholderia sp. 22B1P: PBP221_28870
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Entry
PBP221_28870 CDS
T10680
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pazz Paraburkholderia sp. 22B1P
Pathway
pazz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pazz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PBP221_28870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pazz03400
]
PBP221_28870
Enzymes [BR:
pazz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PBP221_28870
DNA repair and recombination proteins [BR:
pazz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PBP221_28870
Prokaryotic type
PBP221_28870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BEU22747
LinkDB
All DBs
Position
1:3322412..3323230
Genome browser
AA seq
272 aa
AA seq
DB search
MNSAKRSRTPPTQPSLFTDDDTRAAAPPSPAADYQTLESQFEALPPAWRAHLKPFIDSET
YTPLCRFVDGERASGKTVYPADVFRALRLTSPDDVKVVILGQDPYHGEDRGTPQAHGLAF
SVPPSVRPPPSLRNIFKEIAASLGHEAPQHGCLDAWARQGVLLLNTVLTVERDHAASHAK
RGWEKCTDTLIHELAMRHDGLVFMLWGAHAQAKRVLLGGKSHCVLEAPHPSPLSAHRGFL
GCRHFALANEFLEAHGRQPIDWRLPETGEVFA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgcaaaacgctcccgcactccgccgacgcagccgtcgctcttcaccgacgac
gacacccgcgccgccgcgccgccctctcccgccgccgattatcagacgctcgaatcccaa
ttcgaagcgctgccgcccgcctggcgcgcgcacctcaaaccgttcatcgatagcgagacg
tacacgccgctgtgccgtttcgtcgacggagagcgcgcgtccggcaagaccgtctatccc
gccgatgtcttccgcgcgctgcgactcaccagccccgacgacgtcaaggtcgtgattctc
ggccaggacccgtaccacggcgaagaccgcggcacgccgcaggcgcacggtctcgcgttt
tcggtgccgccttcggtgcggccgccgccgtcgctgcgcaacatcttcaaggagatcgcc
gcgagcctgggccacgaagcgccgcagcacggctgtctcgatgcgtgggcgcgacagggc
gtgctgttgctcaacaccgtgctgaccgtcgagcgggaccacgccgcgagtcacgcgaag
cgcggctgggaaaagtgcaccgacacgttgatccacgaactcgcgatgcgtcacgacgga
ctcgtgttcatgctgtggggcgcgcacgcgcaggccaagcgcgtgctgctcggcggcaaa
tcgcactgcgtgctggaagcgccgcacccgtcgccgctgtcggcgcatcgcggatttctc
ggctgccggcatttcgcgctggccaatgaatttctcgaagcacatggccgccagcccatc
gactggcgtttgccggaaacgggcgaagtattcgcctga
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