Paraburkholderia sp. 22B1P: PBP221_29930
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Entry
PBP221_29930 CDS
T10680
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pazz Paraburkholderia sp. 22B1P
Pathway
pazz00300
Lysine biosynthesis
pazz00470
D-Amino acid metabolism
pazz01100
Metabolic pathways
pazz01110
Biosynthesis of secondary metabolites
pazz01120
Microbial metabolism in diverse environments
pazz01230
Biosynthesis of amino acids
Module
pazz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pazz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PBP221_29930 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PBP221_29930 (lysA)
Enzymes [BR:
pazz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PBP221_29930 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
SH3BP5
Motif
Other DBs
NCBI-ProteinID:
BEU22853
LinkDB
All DBs
Position
1:3431779..3433041
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AA seq
420 aa
AA seq
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MTQSAFAYVDGVLHAEGVSAASLAEQFGTPLYVYSRAALTEAWHAYADACAGRHATVHVA
VKANSNLAVLNLFARMGAGFDIVSGGELARVLAAGGKAENTVFSGVGKSVAEMREGLAAG
VKCFNVESIPELDRLNTVASEMGKKAPVSLRVNPDVDAKTHPYISTGLKSNKFGVAFDDA
RATYRAAAAMKNLDVVGIDCHIGSQITEVAPYLDAVDKLLELVEQIEADGVKIKHIDVGG
GLGITYDDETPPDIGDFVRTLLDRIEARGHGHREVYFEPGRSLVGNAGMLLTRVEFLKPG
ADKNFAIVDAAMNDLARPAMYEAYHAIEPVVQRAGDKHVYDVVGPVCESGDWLGRERELA
VEPGDLLAIRSAGAYGFAMSSNYNTRARAAEVMVDGDQAYVVRKREEVKDLFAGETVLPE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgactcaatccgcttttgcctacgtcgacggcgtgctgcacgctgaaggcgtgtccgcc
gcctcgcttgccgagcagttcggcacgccgctctatgtctactcgcgcgctgcgctaacc
gaggcgtggcacgcttacgccgacgcatgcgccggccggcacgcgaccgtgcacgtcgcg
gtcaaggcgaatagcaacctcgccgtgctcaatctgttcgcgcgcatgggtgcggggttc
gacatcgtgtcgggtggtgagctggcgcgcgtgctcgcggcaggcggcaaagcggaaaac
accgtgttttcgggcgtcggcaagagcgtcgcggaaatgcgcgaggggctcgcggcgggt
gtgaagtgcttcaatgtcgaatcgattcccgaactcgaccgcctcaataccgttgcgagc
gaaatgggcaagaaagcgcccgtgtcgctgcgcgtgaatcctgatgtcgacgcaaagacg
catccgtatatctcgacgggcctcaagtcgaacaagttcggcgtcgcattcgacgacgcg
cgcgccacgtatcgcgccgccgccgcgatgaagaacctcgatgtggtgggcatcgactgc
catatcggttcgcagatcacggaagtcgcgccgtatctcgacgccgtcgacaagctgctc
gaactcgtcgagcagatcgaagcggacggcgtgaagatcaagcatatcgacgtaggcggc
ggcctcggcatcacctacgacgacgaaacgccaccggatatcggcgatttcgtgcgcacg
ctcctcgaccggatcgaagcacgcgggcacggccatcgcgaagtgtatttcgagccgggc
cgctcgctcgtcggcaatgccggcatgctgctcacccgcgtcgagtttctgaagccgggt
gccgataagaactttgcgatcgtcgacgcggcaatgaacgacctcgcgcgccctgccatg
tacgaggcgtatcacgcgatcgaacccgtcgtgcagcgtgcaggcgacaagcatgtgtat
gacgtcgtcggtcccgtgtgtgaaagcggcgactggctcgggcgcgaacgcgaactcgct
gtcgaaccgggcgatctgctcgcgatccgttcagcgggcgcctacggtttcgcgatgagc
tcgaactacaacacgcgtgcgcgcgcggccgaagtcatggtcgacggcgaccaggcgtac
gtcgtacgcaaacgtgaggaagtgaaagatctattcgctggcgagacggttctgcccgaa
taa
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