Paraburkholderia sp. 22B1P: PBP221_30040
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Entry
PBP221_30040 CDS
T10680
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pazz Paraburkholderia sp. 22B1P
Pathway
pazz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pazz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PBP221_30040 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pazz03021
]
PBP221_30040 (rpoA)
03400 DNA repair and recombination proteins [BR:
pazz03400
]
PBP221_30040 (rpoA)
Enzymes [BR:
pazz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PBP221_30040 (rpoA)
Transcription machinery [BR:
pazz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PBP221_30040 (rpoA)
DNA repair and recombination proteins [BR:
pazz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PBP221_30040 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
BEU22864
LinkDB
All DBs
Position
1:complement(3444444..3445421)
Genome browser
AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVESLGESHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVTAGDIELAHDCEV
INPDHVIAHLSKGGKLDVQIKVEKGRGYVPGNVRRYGEESAKIIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETNGVISPEEAIRQSARILVDQLSVFAALEGTEAAAEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgttgaagcccaagatcatcgctgttgaatcgcttggtgaaagccac
gcgaaagtggtcatggaaccgtttgaacgcggttacggccacaccttgggtaacgcgctt
cggcgtgtgttgctgtcgtcgatggtgggctacgcgccgaccgaagtgacgatcgcaggc
gtcgtgcacgaatactcgacgctcgatggtgtgcaggaggacgtagtcaacctgttgttg
aacctgaagggcgtggtgttcaagctgcataaccgtgacgaagtgacggttacgctgcgc
aaggaaggcgaaggcgttgtcacagctggcgacatcgagctcgcgcacgactgcgaagtg
atcaatccggatcacgtgatcgcgcatctgtcgaagggcggtaagctcgacgtgcagatc
aaggtcgaaaagggccgtggctatgtcccgggcaacgtgcgtcgttacggcgaagagtcg
gccaagatcatcggtcgtatcgtgctggacgcatcgttttcgccggttcgccgcgtgagc
tatgccgtggagagcgcgcgtgtcgaacagcgtaccgacctcgacaagctcgtgatgaac
atcgaaaccaacggcgtgatttcgccggaagaagcgatccgtcaatcggcgcgtattctg
gtcgatcagctgtcggtgttcgcagcgctggaaggcacggaagcagcagcagaagcaccg
tcgcgcgctccgcagatcgatccgatcctgctgcgtccggtcgatgatctcgaactgacg
gttcgttccgcgaactgcctgaaggccgagaacatctactacatcggcgatctgattcaa
cgcacggaaaacgagctgctgaagacgccgaacctgggtcgcaagtcgctgaacgagatc
aaggaagtgctcgcttcgcgtggcctgacgctcggcatgaagctcgaaaactggccgccg
gctggtctcgacaagtaa
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