Paraburkholderia sp. 22B1P: PBP221_30350
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Entry
PBP221_30350 CDS
T10680
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pazz Paraburkholderia sp. 22B1P
Pathway
pazz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pazz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PBP221_30350 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pazz03019
]
PBP221_30350 (recQ)
03400 DNA repair and recombination proteins [BR:
pazz03400
]
PBP221_30350 (recQ)
Enzymes [BR:
pazz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PBP221_30350 (recQ)
Messenger RNA biogenesis [BR:
pazz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PBP221_30350 (recQ)
DNA repair and recombination proteins [BR:
pazz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PBP221_30350 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
BEU22895
LinkDB
All DBs
Position
1:complement(3463393..3465240)
Genome browser
AA seq
615 aa
AA seq
DB search
MSRSLQILNEVFGYPAFRGQQGEIVEHVSSGGDCLVLMPTGGGKSLCYQIPSLVRREAGL
GAGIVVSPLIALMQDQVAALREVGVRAAYLNSTLSGADAAATERALREGEIDLLYVAPER
LMTPRFLDLLERARIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPSVPRIALTATAD
AITRDEIIHRLALDDARVFVSSFDRPNIRYRIVEKDNARSQLLDFIRAEHTRTDGTTDAG
VVYCLSRRKVEETAEWLKAQGVRALPYHAGMEFEVRQRHQEIFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPANAWMTYGLGDVVQQRKMIDESEADD
AHKRVQTGKLDALLGLCETATCRRVRLLAYFGEEGKPCGNCDTCLEPPASWDATRESQMA
LSCAFRAQRASGFNFGAGHLIDILRGNRTEKILQRGHEKLSTFGIGAALSEHEWRAVFRQ
LVAFGFLTVDHDGFGALVLTEASKPVLKGEQQVTMRRYVKPVRTRQSSGRTSERADPTAG
MNSRERARWDRLRAWRTETARSDGVPAYVIFHDATLAEIARNSPGSLDDLRHIPGMGARK
LDRFGDELLEVVAAD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgttcgctccagatcctcaacgaagttttcggttatcccgcgtttcgagggcag
cagggcgaaatcgtcgaacacgtttcttcgggcggcgactgtctggtgttgatgccaacg
ggtggcggcaaatcgctgtgttatcagattccgtcgctggtgcggcgtgaggcgggcttg
ggcgcgggcatcgtcgtctcgccgttgatcgcgctgatgcaggatcaggtggcggcgctg
agggaagtcggtgtgcgcgcggcgtatctgaactcgacgctgtcgggcgccgatgcagcc
gcgacggagcgtgcgctgcgtgaaggcgaaatcgatctgctgtatgtcgcgcccgagcgg
ctgatgacgccgcgctttcttgatctgctcgaacgcgcgcgcatcggactgttcgcaatc
gacgaagcgcattgcgtgtcgcaatggggccacgatttcaggcctgaatacatccagctg
tccgtgttgcacgagcggttcccttcggtgccgcgcatcgctttgaccgccacggccgac
gcgatcacgcgcgacgaaatcatccaccgcctggcgctcgacgacgcgcgggtgttcgta
tcgagcttcgatcggccgaatattcgataccgtatcgtcgagaaggacaacgcgcgttcg
caactgctcgacttcattcgcgcggaacacacgcgcactgacggcaccactgacgcgggt
gtcgtgtattgcctgtcgcgccgcaaggtcgaggagacggccgaatggctcaaggcgcag
ggcgtgcgggcgctgccgtatcacgcggggatggagttcgaagtgcgtcagcggcatcag
gaaatcttccagcgcgaagaaggcatcgtgatgtgcgcgacgatcgcgttcggcatgggc
atcgacaagccggacgtgcgctttgtcgcgcatctggatttgccgaagagcgtcgaaggc
tattaccaggaaacgggccgtgccggccgcgatggtttgccggcaaacgcgtggatgacc
tacggtctcggcgacgtcgtgcagcagcgcaagatgatcgacgagtccgaagccgacgat
gcgcataagcgcgtgcaaaccggcaagctcgatgcgttgctcggcttatgcgaaacggcg
acgtgccggcgcgtgcggctgctcgcttacttcggcgaagagggcaagccctgcggcaac
tgcgatacctgtctcgagccgccggcgtcgtgggatgcgacgcgtgaatcgcagatggcg
ctgtcatgcgcgtttcgcgcgcagcgcgccagcggattcaatttcggcgcaggacatctg
atcgacatccttcgcggcaatcgtactgagaagattctccagcgcgggcacgagaagctg
agcacattcggaatcggtgcggcgttgtccgagcatgaatggcgcgccgtgtttcgccag
ttggtcgcattcggatttctcaccgtcgatcacgacggtttcggcgcactcgtgctgacc
gaagccagcaagcctgttctgaaaggcgagcaacaagtgacgatgcgccgctatgtgaag
ccggtgcgcacgcgtcaatcttccggacgcacaagcgagcgcgccgatccgaccgccggt
atgaattcacgtgagcgtgcgcgctgggaccgtctgcgcgcctggcgcaccgaaaccgcg
aggagcgacggcgtaccggcgtacgtcattttccacgacgcgacgctggccgaaatcgcg
cgcaactcccccggatccctcgacgacttgcggcacatcccgggcatgggcgcgcgcaag
ctcgaccgtttcggcgacgaactcctcgaagtcgtcgctgcggattga
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