Paraburkholderia sp. 22B1P: PBP221_32140
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Entry
PBP221_32140 CDS
T10680
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pazz Paraburkholderia sp. 22B1P
Pathway
pazz00260
Glycine, serine and threonine metabolism
pazz00630
Glyoxylate and dicarboxylate metabolism
pazz00670
One carbon pool by folate
pazz00785
Lipoic acid metabolism
pazz01100
Metabolic pathways
pazz01110
Biosynthesis of secondary metabolites
pazz01200
Carbon metabolism
Module
pazz_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pazz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PBP221_32140 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PBP221_32140 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PBP221_32140 (gcvP)
00670 One carbon pool by folate
PBP221_32140 (gcvP)
Enzymes [BR:
pazz01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
PBP221_32140 (gcvP)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
BEU23074
LinkDB
All DBs
Position
1:3679380..3682307
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AA seq
975 aa
AA seq
DB search
MKLEHPDRLMNRTPLSLAALEVHDAFAERHIGPDTADQQSMLEALGFASRAALMDAVIPK
TIRRQDALPLGPFAQPKSEAEALAALRELADKNQVFRSYIGQGYYNAHTPTVILRNVLEN
PAWYTAYTPYQPEISQGRLEALLNYQQMIVDLTGLAISNASLLDESTAAAEAMTLLQRVG
KPKSNIFYVADDVLPQTIEVVKTRAKPVGIEVKVGPAAEAASSNAFGVLLQYPGVNGDVL
DYRALAEAIHAAGGHVVAAADLLALTMLTPPGEWGADVAVGNSQRFGVPVGFGGPHAAYL
AVRDEFKRQMPGRLVGVTVDAQGNPALRLALQTREQHIRREKATSNVCTAQALLAIMASM
YAVYHGPRGLKMIAQRVNRIAALLAEGAKQLGYTLVNESFFDTLTFETGARTQALHDAAT
AKGINLRHVSETRVGLSLDETTTRADLADLLAAFAQAAFVEAVPQIDELDAKLGASNTFP
KTLERESAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLP
VTWPEFGQIHPFAPAEQTVGYREMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLIIH
AYHESRGEGHRNVCLIPASAHGTNPASAQMAGMQVVVVACDAQGNVDIEDLKKKAEQHSA
KLAAIMITYPSTHGVFEQNVREVCEIVHAHGGQVYVDGANMNAMVGLAAPGQFGGDVSHL
NLHKTFCIPHGGGGPGVGPVAVGAHLAKFLPNQTSTGYERDANGIGAVSAAPYGSASILP
ISWMYIAMMGAKNLTAATETAILNANYVANKLAPHYPVLYSGPGGLVAHECILDLRPIKE
TSGISVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKEELDRFIEAMIAIRNEIRD
VEEGRSDREDNPLKHAPHTAAVVVTNDWMHAYARETAAYPLPSLIAKKYWPPVGRADNAY
GDRNLFCSCVPMADY
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgaacacccggatcgtctgatgaaccgcactcctctctcgctcgccgcgctc
gaagtgcatgacgccttcgccgaacggcatatcggcccggatacggccgatcagcagtcg
atgctcgaagccctcggcttcgcatcgcgcgccgcgttgatggacgcggtgattccgaag
acgattcgccgccaggacgcgctgccgctcggccccttcgcccagccgaagagcgaagcc
gaagcgctcgccgcgctgcgcgaactcgcggacaagaaccaggtgttccgctcgtacatc
ggtcagggctactacaacgcgcacacgcccaccgtcatcctgcgcaacgtgctcgaaaat
ccggcgtggtacacggcttacacgccgtaccagccggaaatctcgcaaggccgcctcgaa
gcgctgctgaactatcagcagatgatcgtcgacctgacaggcctcgcgatctcgaacgcg
tcgctgctcgacgaatcgacggccgccgccgaagcgatgacgctgctgcaacgcgtcggc
aagccgaagtcgaacattttctacgtggcagacgacgtgctgccgcaaaccatcgaagtc
gtgaagacgcgcgcgaagcccgtcggcatcgaagtgaaggtcggtccggctgccgaggcg
gcgagttcgaatgcgttcggcgtgctgctgcaatatccgggcgtgaacggcgacgtgctc
gactaccgcgcgctcgctgaagcgatccatgcagcgggcggccacgtggtcgccgccgcc
gatctgctcgcgctgacgatgctcacgccgccgggcgaatggggcgcggacgtggccgtc
ggcaactcgcagcgctttggcgtgccggtcggcttcggcggcccgcacgcggcgtatctc
gccgtgcgcgacgaattcaagcgtcagatgccgggccgtctggtcggcgtcaccgtcgat
gcgcaaggcaaccccgcgctgcgtctcgcgctgcaaacgcgcgaacagcacatccgccgc
gaaaaggcgacgtcgaatgtgtgcacggcgcaagcgctgctcgcgatcatggccagcatg
tacgccgtctatcacggcccgcgcggcctgaagatgattgcgcaacgcgtgaaccgcatc
gctgcgctgctcgcggaaggcgcgaagcaacttggctatacgctcgtcaacgaatcgttc
ttcgacacgctcaccttcgaaacgggcgcgcgcacgcaagcgctgcacgacgccgcgacg
gccaagggcatcaatctgcgtcacgtgagcgaaacgcgcgtcggtctgtcgctcgacgaa
accaccacgcgcgccgacctcgccgatctgcttgccgctttcgcgcaagccgcgttcgtc
gaagccgtgccgcaaatcgacgaactcgacgcaaagctcggcgcgtcgaacacgttcccg
aagacgctcgaacgcgagagcgcgtatctgacgcaccacgtattcaaccgtcaccattcg
gaaacggaaatgctgcgctatctgcgcagcctgtcggacaaggacctcgcgctcgaccgc
tcgatgatcccgctcggctcgtgcacgatgaagctgaacgcgacgtcggaaatgctgccc
gtcacgtggcccgagttcggccagatccatccgttcgcgcccgccgagcaaaccgtcggc
taccgcgaaatgatcgatcagctcgaacagatgctggtcgccgccaccggctacgcggcc
gtgtcgctgcaaccgaacgccggctcgcaaggcgagtacgcgggtctgctgatcatccac
gcgtatcacgagtcgcgcggcgaaggtcatcgcaatgtgtgtctgattcccgcttcggcg
cacggcacgaaccccgcgtcggcgcagatggcaggcatgcaggtcgtcgtcgttgcatgc
gacgcgcaaggcaacgtcgatatcgaagacctgaagaagaaggccgaacagcattcggcc
aaactcgcggcgatcatgatcacgtatccgtcgacgcacggcgtgttcgagcagaacgtc
cgcgaagtctgcgagatcgtgcatgcgcacggcggccaggtctacgttgacggcgcgaac
atgaacgcgatggtgggtctcgcggcgccgggccagttcggcggcgatgtttcgcacctg
aacctgcacaagacgttctgcattccgcatggcggcggcggaccgggcgttggccctgtt
gccgtcggcgcgcatctggcgaagttcctgccgaaccagacgtcgacgggctatgaacgc
gacgcgaacggcatcggcgccgtctccgctgcgccgtatggctcggcgtcgatcctgccg
atctcgtggatgtacatcgcgatgatgggcgcgaagaacctgacggctgccaccgaaacc
gcgatcctcaacgcgaactacgtcgcgaacaagctcgcgccgcattacccggtgctgtat
tcgggcccgggcggactggtcgcgcacgagtgcattctcgatctgcgccccatcaaggaa
acgagcggcatctccgtcgatgacgtcgcgaagcgcctgatggactacggcttccacgcg
ccgacgatgagcttcccggtgcctggcacgctgatggtcgagccgaccgaatcggaatcg
aaggaagagctggatcgtttcatcgaagcgatgatcgcgattcgcaacgaaatccgcgat
gtcgaggagggtcgcagcgatcgcgaagacaatccgctcaagcacgcaccgcatacggcg
gcagtggtcgtcacgaacgactggatgcatgcgtatgcgcgtgaaacggcggcgtatccg
ctgccgtcgctgatcgcgaagaagtactggccgcccgttggtcgtgctgacaacgcgtac
ggcgatcgcaacctgttctgctcgtgcgtgcccatggcagactactag
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