Paraburkholderia sp. 22B1P: PBP221_40850
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Entry
PBP221_40850 CDS
T10680
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pazz Paraburkholderia sp. 22B1P
Pathway
pazz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pazz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PBP221_40850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pazz02000
]
PBP221_40850
Transporters [BR:
pazz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PBP221_40850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
BEU23945
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All DBs
Position
2:879590..880687
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AA seq
365 aa
AA seq
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MQDIKRGRRQAIKTIGAALAASTLPMPFINVRAQQQQNFSGKTLRLLTWSDDTGTAALRN
IAATFTAKTGAKVIADRADGTSGMVAKVKAAGDRPTYDVITLAGVGAAGLGDAGLLVKPD
LDKLPNLKDVSPQYRTGANGFGVGYLLWSDGLIYNTSTVKTAPDSYEALWDPKYAGRLFL
PPPEWAEAVDLAIIAAKLAGGSQQNIDPGFKKLALLKDHVMTLGENPNQVADLFRTGSLD
IGGIYSPAFFPAQIRKPEYKMGVTYGMKEGFATQLMFTVIPKSHPGDADLIHAFINHSLD
AGVQGRMAADVLNGPVNSKAMIPAESSAYVPSPKQIAEKAVLHDDKALAAVQPAWIKRYT
EIFSA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacatcaaacggggcagaaggcaggcaatcaagacgatcggcgcggcactcgcg
gcatcgacgttgcccatgcctttcatcaacgtgcgcgcccagcagcaacagaatttctcc
ggaaagaccctgcgtctcctcacctggtccgacgatacgggcaccgccgcgctgcgcaac
atcgccgcgaccttcaccgcgaagacgggggcgaaagtgatcgccgaccgcgctgacggg
acgtccggcatggtcgcgaaggtcaaggcagcaggcgaccgtcccacgtacgacgtgatc
acgctggcaggcgtcggcgcggccggtctcggcgacgcaggcctgctcgtcaagccggat
ctggacaaactgccgaacctgaaagacgtgtcgccgcaataccgcaccggggcgaacggc
ttcggcgtcggttatctgctctggtcggatgggctgatttacaacacgtcgacggtcaag
acggcgcccgactcgtacgaagcgctgtgggacccgaaatacgcgggacgcctgttcctg
ccgccgcccgagtgggccgaggcagtcgatctcgcgatcatcgcggcgaaactcgcgggc
ggttcgcagcagaacatcgatccgggtttcaagaagcttgcgctactgaaagatcatgtg
atgacgctcggtgaaaacccgaatcaggttgccgatctgtttcgcaccggctcgctcgat
attggcggcatttattcacccgcatttttccccgctcagatccgcaagccggagtacaag
atgggcgtgacgtacgggatgaaggaaggcttcgcgacgcaactcatgtttaccgtcatt
ccgaagtcgcatccgggcgatgccgatctgatccacgcgttcatcaaccattcgctcgat
gcaggcgtgcagggccgcatggccgccgacgtcctgaatggcccggtcaattcgaaggcc
atgattcccgccgagagcagcgcgtatgtgccgagcccgaagcagatcgccgaaaaagcg
gtgctgcacgacgacaaggcactcgcggccgtgcagcccgcatggatcaagcgctacacg
gagatcttctcggcatga
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