Paraburkholderia sp. 22B1P: PBP221_41020
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Entry
PBP221_41020 CDS
T10680
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pazz Paraburkholderia sp. 22B1P
Pathway
pazz00260
Glycine, serine and threonine metabolism
pazz00460
Cyanoamino acid metabolism
pazz00630
Glyoxylate and dicarboxylate metabolism
pazz00670
One carbon pool by folate
pazz00680
Methane metabolism
pazz01100
Metabolic pathways
pazz01110
Biosynthesis of secondary metabolites
pazz01120
Microbial metabolism in diverse environments
pazz01200
Carbon metabolism
pazz01230
Biosynthesis of amino acids
pazz01240
Biosynthesis of cofactors
pazz04981
Folate transport and metabolism
Module
pazz_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pazz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PBP221_41020 (glyA)
09102 Energy metabolism
00680 Methane metabolism
PBP221_41020 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PBP221_41020 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PBP221_41020 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PBP221_41020 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PBP221_41020 (glyA)
Enzymes [BR:
pazz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PBP221_41020 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BEU23962
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Position
2:903452..904708
Genome browser
AA seq
418 aa
AA seq
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MFSKEQTIAGFDPELSNAMLLERQRQEDHIELIASENYTSPRVLEAQGSVLTNKYAEGYP
GKRYYGGCEHVDVVESLAIDRARQLFGAAYANVQPHSGSQANAAVYLALLAPGDSILGMS
LAHGGHLTHGAKVSFSGKVFNAVQYGVDASTGLIDYDEVERLALEHRPKMIVAGFSAYSR
VLDFARFREIADRIDAYLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLI
LARANEAIEKKLNSMVFPGTQGGPLMHVIAAKAVAFREALGAEFVAYQKQTLANARAMVA
VFIERGYKIVSGGTDDHLFLVDLIDKGITGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GIRIGTPALTTRGFDENDAKLTASLVCDVLDHLGDAQTEARVREQVGQLCARLPVYDR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaaagaacagacgatcgcaggcttcgatcccgaactgtcgaatgcgatgctg
ctcgagcggcaacggcaggaagatcatatcgaactgatcgcatcggaaaactacacgagc
ccgcgcgtgctcgaagcacagggttcggtgctgaccaacaagtacgcggaaggctatccc
ggcaagcgctattacggcggctgcgagcatgtggacgtggtcgagtcactcgccattgac
cgcgccaggcagcttttcggcgcagcgtatgcgaacgttcagccgcatagcggctcgcag
gccaatgcagccgtgtatctggccttgctcgcaccgggcgacagcattctcggcatgagt
ctagcgcacggcggtcatctgacgcacggtgcgaaagtgtcgttttcgggcaaggtgttc
aatgcggtgcaatacggcgtcgatgcgtcgaccggcttgatcgattacgacgaagtcgaa
cggctcgcgctcgagcatcggccgaagatgatcgtcgcgggcttttcggcgtattcgcgt
gtgctcgactttgcacgctttcgtgaaatcgccgatcgtatcgacgcatatctattcgtc
gatatggcgcatgtggcgggtctcgttgccgccggcctgtatccgaatcccattccgttt
gcggatgtcgtgacgacgaccacgcacaagaccttgcgcggcccgcgcggcggcctgatt
ctcgcgcgcgcaaatgaagcgatcgaaaagaagcttaattcgatggtctttccgggcacg
caaggcggcccgctgatgcatgtgatcgcagcgaaagcggtcgccttccgtgaggcgctc
ggcgcggaattcgttgcctaccagaagcagacgttggccaatgcgcgcgcgatggtggct
gttttcatcgaacgcggctataagatcgtatcgggcggcaccgacgatcatctgttcctg
gtggatctgatcgataaaggcatcacaggcaaggacgcggacgccgcgctcggccgcgcg
cacatcacggtgaacaagaacgcggtgccgaacgatccacaatcgccattcgtgacgagc
ggcatccgcatcggcacgcctgcactgaccacgcgtggcttcgacgagaacgacgcgaag
ctcacggcatcgctcgtatgcgatgtactcgatcacctgggcgatgcgcagacggaagcc
cgcgtgcgcgagcaggttgggcagctttgcgcgcgattgcccgtgtatgaccgctga
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