KEGG   Paraburkholderia sp. 22B1P: PBP221_41020
Entry
PBP221_41020      CDS       T10680                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
pazz  Paraburkholderia sp. 22B1P
Pathway
pazz00260  Glycine, serine and threonine metabolism
pazz00460  Cyanoamino acid metabolism
pazz00630  Glyoxylate and dicarboxylate metabolism
pazz00670  One carbon pool by folate
pazz00680  Methane metabolism
pazz01100  Metabolic pathways
pazz01110  Biosynthesis of secondary metabolites
pazz01120  Microbial metabolism in diverse environments
pazz01200  Carbon metabolism
pazz01230  Biosynthesis of amino acids
pazz01240  Biosynthesis of cofactors
pazz04981  Folate transport and metabolism
Module
pazz_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:pazz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    PBP221_41020 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    PBP221_41020 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PBP221_41020 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    PBP221_41020 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    PBP221_41020 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    PBP221_41020 (glyA)
Enzymes [BR:pazz01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     PBP221_41020 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: BEU23962
LinkDB
Position
2:903452..904708
AA seq 418 aa
MFSKEQTIAGFDPELSNAMLLERQRQEDHIELIASENYTSPRVLEAQGSVLTNKYAEGYP
GKRYYGGCEHVDVVESLAIDRARQLFGAAYANVQPHSGSQANAAVYLALLAPGDSILGMS
LAHGGHLTHGAKVSFSGKVFNAVQYGVDASTGLIDYDEVERLALEHRPKMIVAGFSAYSR
VLDFARFREIADRIDAYLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLI
LARANEAIEKKLNSMVFPGTQGGPLMHVIAAKAVAFREALGAEFVAYQKQTLANARAMVA
VFIERGYKIVSGGTDDHLFLVDLIDKGITGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GIRIGTPALTTRGFDENDAKLTASLVCDVLDHLGDAQTEARVREQVGQLCARLPVYDR
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgttttcaaaagaacagacgatcgcaggcttcgatcccgaactgtcgaatgcgatgctg
ctcgagcggcaacggcaggaagatcatatcgaactgatcgcatcggaaaactacacgagc
ccgcgcgtgctcgaagcacagggttcggtgctgaccaacaagtacgcggaaggctatccc
ggcaagcgctattacggcggctgcgagcatgtggacgtggtcgagtcactcgccattgac
cgcgccaggcagcttttcggcgcagcgtatgcgaacgttcagccgcatagcggctcgcag
gccaatgcagccgtgtatctggccttgctcgcaccgggcgacagcattctcggcatgagt
ctagcgcacggcggtcatctgacgcacggtgcgaaagtgtcgttttcgggcaaggtgttc
aatgcggtgcaatacggcgtcgatgcgtcgaccggcttgatcgattacgacgaagtcgaa
cggctcgcgctcgagcatcggccgaagatgatcgtcgcgggcttttcggcgtattcgcgt
gtgctcgactttgcacgctttcgtgaaatcgccgatcgtatcgacgcatatctattcgtc
gatatggcgcatgtggcgggtctcgttgccgccggcctgtatccgaatcccattccgttt
gcggatgtcgtgacgacgaccacgcacaagaccttgcgcggcccgcgcggcggcctgatt
ctcgcgcgcgcaaatgaagcgatcgaaaagaagcttaattcgatggtctttccgggcacg
caaggcggcccgctgatgcatgtgatcgcagcgaaagcggtcgccttccgtgaggcgctc
ggcgcggaattcgttgcctaccagaagcagacgttggccaatgcgcgcgcgatggtggct
gttttcatcgaacgcggctataagatcgtatcgggcggcaccgacgatcatctgttcctg
gtggatctgatcgataaaggcatcacaggcaaggacgcggacgccgcgctcggccgcgcg
cacatcacggtgaacaagaacgcggtgccgaacgatccacaatcgccattcgtgacgagc
ggcatccgcatcggcacgcctgcactgaccacgcgtggcttcgacgagaacgacgcgaag
ctcacggcatcgctcgtatgcgatgtactcgatcacctgggcgatgcgcagacggaagcc
cgcgtgcgcgagcaggttgggcagctttgcgcgcgattgcccgtgtatgaccgctga

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