Paraburkholderia sp. 22B1P: PBP221_65240
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Entry
PBP221_65240 CDS
T10680
Name
(GenBank) LysR family transcriptional regulator
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
pazz Paraburkholderia sp. 22B1P
Module
pazz_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
pazz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pazz03000
]
PBP221_65240
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pazz01504
]
PBP221_65240
Transcription factors [BR:
pazz03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PBP221_65240
Antimicrobial resistance genes [BR:
pazz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
PBP221_65240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
BEU26384
LinkDB
All DBs
Position
p22B1P1:643042..643959
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AA seq
305 aa
AA seq
DB search
MDQMLALRVFVRIAESGGFGKAADSLNIPRPTVTKLIQDLETHLRVKLFQRSTRKVTVTD
EGQAYYHRALKVLADVDEMDTLFADSRGAPRGRLRVDIGSSLANLILLPHLPLFRQRYPE
IQLELGVSDREVDLIGEGVDCVIRGGELTDTSLIARRIASLDWGTYAGAGYMRSRELPTH
PEELYGEHDLVGYFSSRTGRVFTMSFERGDETIQIDPKGTRGVSVNESTAHLTALVSGLG
VGQTFAFMARAALASGDLVQLLPEWSRPLHPLHIVFAKSQHDSARMRAFVDWALEIFRPY
DRLHT
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggatcagatgctcgcgttgcgcgtgttcgtgcggatcgccgaatcgggcggcttcggc
aaagccgccgatagcctgaacataccgaggcccaccgtcaccaagctgatccaggatctc
gaaacgcacttgcgggtcaagctgtttcagcgctccacgcgcaaggtgaccgtcaccgac
gaaggccaggcttattaccatcgcgcgctgaaggtgcttgccgacgtcgacgaaatggac
acgcttttcgccgattcgcgtggcgctccgcgcgggcgtttgcgggtggatatcggatcg
tcgctggccaacctgatcctgttgccgcatcttccgctgttccggcaacgatatccggag
atccagctggagcttggcgtcagcgacagggaagtcgatctgatcggcgagggcgtcgac
tgtgtgatccggggtggcgaactgacggacacgtcgctgattgcaagacgtatcgcgagc
ctcgattggggcacgtatgcgggcgcgggatacatgcgatcgcgcgagctgccgacgcat
ccggaagaactctacggcgagcacgacctggtcggctatttctcatcgcggacagggcgc
gttttcacgatgtccttcgagcgcggcgacgagacgatccagatcgacccgaaaggcacg
cgcggcgtttccgtcaatgagagtaccgcgcatctgactgcgctggtcagcgggctcggc
gttggtcagaccttcgcgttcatggcgcgtgcggcactcgcgagcggcgatctcgttcag
cttcttccggaatggagccggccgttgcatcctctgcatatcgtgttcgccaaatcgcaa
cacgacagcgcgaggatgcgggcgttcgtcgattgggcgctggagattttccggccgtat
gaccgcttgcatacgtag
DBGET
integrated database retrieval system
