Paraburkholderia sp. 22B1P: PBP221_77850
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Entry
PBP221_77850 CDS
T10680
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
pazz Paraburkholderia sp. 22B1P
Brite
KEGG Orthology (KO) [BR:
pazz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pazz03000
]
PBP221_77850 (prpR)
Transcription factors [BR:
pazz03000
]
Prokaryotic type
Helix-turn-helix
Other families
PBP221_77850 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
PAS_4
AAA_16
PAS_8
AAA_7
AAA_2
HTH_7
PAS
PAS_7
AAA_3
AAA_22
AAA
HTH_23
DUF6262
ABC_sub_bind
Diguanyl_cycl_sensor
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BEU27645
LinkDB
All DBs
Position
p22B1P1:complement(2078000..2079949)
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AA seq
649 aa
AA seq
DB search
MSTPSTVSNPRPRIWAMGISRLRDLFVDIASEYAGRADLRVVARGFDDAMQEIDAAGGER
PDVIVAGGSNAAYLKARVNVPVVAITPTGFDVMQALARARRDGNSVALVTHGETPDEVKR
FTAAYGIDVIFASYRSTEDAEDCVRELQERGVDAVVGPGHVTDLAERAGMGAVFLYSRTS
VRSAFDTALEVAQATRAEGVRRQRLDNLLQHLRDGVVALDAQGRVEAINQRLAGVLGIDA
ASAAGMPLQQLAPDIASALPDADGDTLVSVRGTSYLVHRGPLAGAGHAAGTVLTFQESRA
VERLDRTLRSRQRGQQFAARYKLDDLVGECPSIERVRTLVRRYAKSDATVLILGESGTGK
EMVAQSMHRLSARRDFAFVAINCGAFPEALLESELFGYEEGAFTGARKGGKAGLIEAAHR
GTLFLDEIAEMPLPLQSRLLRVLQEREVVRLGSTEPTRVDIRVVAATHRALTEGIEAGTF
RADLYYRLNILSIALPPLRERTTDVLPLAAELLLQAAAREPRLSTRVPDLQAATRVLAQI
GEPLGGYAWPGNVRELQNVIERIAVELADAEGDTGDAFTREMLDVVAPELAASSVPKKND
ALTLRERSRHVEADEIRAMLAACGGDRDAACKALGISKTTLWRKLNATQ
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgccttccaccgtttccaacccgcgcccgcgcatctgggcgatgggcatcagc
cgtttgcgcgacctgttcgtcgatatcgccagcgagtacgcagggcgcgcggacctgcgc
gtggtcgcgcgcggcttcgacgacgccatgcaggaaatcgacgcggcgggcggcgagcgt
cccgacgtgatcgtcgcgggcggctcgaatgccgcgtatctgaaagcgcgcgtcaacgtg
cccgtcgtcgccattacgccgaccggcttcgacgtcatgcaggcgctcgcacgcgcgcgg
cgcgacggcaattcggtggcgctcgtcacgcacggcgagacacccgacgaggtgaagcgc
ttcacggcggcctacggcatcgacgtgatcttcgcgtcatatcgttcgacagaagacgcg
gaggactgcgtgcgcgagttgcaagaacgcggcgtcgatgccgtggtcgggccggggcat
gtgaccgatctcgcagagcgcgcgggcatgggcgctgtctttctgtactcgcgcacgtcg
gtgcgcagcgcgttcgacaccgcgctcgaagtcgcccaggctacgcgcgccgagggcgtg
cggcgccagcgtctcgacaacctgttgcagcacttgcgcgacggcgtcgtggcgctcgac
gcgcaagggcgcgtcgaagcgatcaatcagcgtcttgcgggcgtgctcggcatcgacgcg
gcgagcgctgcgggcatgcctttgcagcagctcgcgccggacatcgccagcgcgctgccc
gatgccgatggcgatacgctggtgtccgtgcgcggcacgagctatctcgtgcatcgcggg
ccgctggcgggcgcggggcatgcggcgggcactgtactgacgttccaggaatcgcgtgcc
gtcgaacggctcgatcgcacgctgcgttcgcggcagcgcggacaacagttcgccgcgcgc
tacaagctcgacgatctggtcggcgaatgtccgtcgatcgaacgcgtgcgcacgctggtg
cggcgctacgcgaagtcggatgcaaccgtgctgatcctcggcgaaagcggcacgggcaag
gaaatggtcgcgcagagcatgcatcggttgagcgcgcggcgcgacttcgcgttcgtcgcg
atcaattgcggcgcgtttccagaggccttgctggaaagcgagctgttcggctatgaggaa
ggtgcgttcacgggcgcgcgcaagggcggcaaagcgggtttgatcgaagccgcgcatcgc
ggcacgttgtttctcgatgagatcgccgaaatgccgctgccgttgcaaagccggctgctg
cgtgtgttgcaggaacgggaagtggtgcggctcggttcgacggagccgacgcgcgtcgac
atacgcgtcgtcgccgcgacgcaccgcgcactgacggagggtatcgaagcagggaccttt
cgcgccgatctctactatcggttgaacattctgagcatcgcgctgccgccgctgcgtgag
cgcacgacggacgtattgccgctcgcagccgaactgctgttgcaggctgccgcgcgcgag
ccgaggctctcaacacgcgtccccgatttgcaggccgcgacgcgtgtgcttgcgcagatc
ggcgagcctttaggcggttatgcgtggcccggcaatgtgcgcgaattgcagaacgtgatc
gagcggatcgccgtcgaactcgccgacgcggaaggcgacaccggcgacgcgttcacgcgc
gagatgctcgatgtcgtcgcgcccgaactggccgcgtcatccgtgccgaaaaagaacgat
gcgctgaccttgcgcgagcgcagccgtcatgtcgaagcggacgaaatacgcgcgatgctg
gctgcgtgcggcggcgatcgcgacgccgcgtgcaaggcactcggtatcagcaagaccacg
ctgtggcgcaagctgaacgcgactcaatga
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