Paraburkholderia sp. 22B1P: PBP221_78800
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Entry
PBP221_78800 CDS
T10680
Name
(GenBank) discoidin domain-containing protein
Organism
pazz Paraburkholderia sp. 22B1P
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F5_F8_type_C
F5_F8_type_C_2
I-set
Ig_3
Ig_2
Glyco_hydro2_C5
Glyco_hydro_2
Glyco_hydro_2_C
DUF4982
Glyco_hydro_2_N
Glyco_hydro_2_N2
BetaGal_ABD2
Lcl_C
AMPK1_CBM
Receptor_2B4
DUF7490
Motif
Other DBs
NCBI-ProteinID:
BEU27740
LinkDB
All DBs
Position
p22B1P1:complement(2186283..2191880)
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AA seq
1865 aa
AA seq
DB search
MMLLCVATHAVASEALPPSNHIRINLGATPWKYVKDNDDANSMQPGFNDSGWAQVGVPQT
PSDNDTFLNWRSGGDQGYLTGNINWYRKHFTLDPSFANRKIYIEFEGAHTGAQVYINGTL
IRGNSQINRDATHVLGFIPFIVDITNYVKFDGSDNVLAVKVARGDKFFESPDFAGAFRFG
QDDTGLFRPVWMHITDRVHIPENIYAVLNTWGTYVATVAASPSSATIRVQTNVLNEYSTD
QKVTLTTQIVDAAGAVVVTAQDTRTVPANVQPGLQPTLFDQVLTVSNPNLWYPNNSIYGK
PYLYRVIHSVSIDGVVVDTTESPLGIRTITWDQNFPIINGHPHYLWGASGRYDYPALGSA
VPPELQWKDLSLLAQAGGSLYRPGHSSQGRDFLDAADAYGVMMVQPSGEGEGGFAVICTA
QTAPDVKCMTQNNVTLKTELHRDMIVHDRNHPSVLAWEADNGATDTAFAQSLKALSQVWD
PINTRAQADRTPNPNNGDILGCSGNGCDINVKKDYPNSPAWGSEYWGDGVGRWKYDFELA
FAVKYLKTWVASVAGKSFGIAHWYLADTPGEINTQTDGIAPEAVRGNGASMMDANRLPRL
IYYIYQAAWTPFEIKPVVKLAHTWNRAGTVTVNAFSNCPAVRLRLNGELIGGDQVPNPTS
MDPTDLTQNTTSLPTQVHWDNIKWAPGTLTAECLDNNRQVAAYDSLVTAGPADHILLTVE
PELVKPSGESFALTANGTDAAVITATVVDANNVRVPDASQTLTFSVSGPGTYRGGSDHDV
TPNQPLSYHAPGDPNLSVEGGMTRIAVKTQFTPGAVTVTATSPGLGSGTATFNVVPTSAQ
QTFNGNALVVGPQPPSALKIITQPSDQRVTQGQSGQFYVLSAGAAPISYQWMKNGAAIPG
ATGYTYTTPAVQTSDDGVTYSVAVRNANSSVTSNAARLTVVQPAAPTITTQPLSLSITSG
QSAEFTVLAAGSPVLSYQWLKNDEPIPGANQPVYDTPATQTSDSGSVYKAVVTNSAGTIT
SAGATLTVSVATPPVIVSQPHSQSVPFGQSVTFNVLASGSAPLKYQWTKDGKPYGTNSAS
IVIASAQGSDGGNYAVTITNSAGSVTSDPATLTVSGADNSNLALNAKAMSSSDQNGGLKA
QYAVDGSVASRWSSAPEIDPSWITVDLGSIQTFNKVVLMWENAAASAYKLQVSNDNSNWT
NVLPNDQIIAGHGGTETTVFPSTSARYVRMLGLQRTTQYGYSLFEFQVFDAPQCGSETER
FTLLGAKPGTWNSTIAGLPSGPYVPNVKDNVSGLVWQQYYTTFPNQGAQFTQTVAKQYCA
AIGMRLPTQNEALTVARSNFASCAFPAPWGTWTTTGVPNASTQAYLAFSSGQSVPGIIDN
TPGWSLCVSGNTADAPVISAQPASVKVSEGQAAQFSVGVTGTGPFSFQWMRGTTVVAITT
NPTYTTPPTTVAADNGAAYSVVVTNGGGSATSATAILTVTAATGGDGGNGGDGGNGGDGG
NGGNGGDGGDGGNGGVPSANLARGKVATSSGVQDEGYAPTNAVDGNLGSRWSSDFNDDAW
ITVDLGQQTQFDRVVLNWENAYGKAYLIQASNDNQTWTNIIPQRAGAGGVEDISLPVTNA
RYVRMQGVKRASQYGYSLFEFEVYNSAATPKLTVTASSSANGTISPSGAVGVIQGGSQTF
TALPAAGYGVGSMTVDGKNLGVQSTYTFTNVTAEHSISVNFVPLSASVNLALNRPATSSG
DENDNTPPTLAVDGNTGTRWSSKFIDPSWIMIDLGSEQTFNRVVLNWENAHAIAYQIQTS
HDNVDWSNTVYTATDSKGGVEDLSFPATTARYVRLYGTKRSTDYGYSLFEFGVYNNVSST
QRARQ
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgctttgcgttgcgactcacgctgtcgcgagcgaagcgctgccgccatccaat
cacatcaggatcaatctgggggcgacgccctggaagtacgtcaaggacaacgacgacgcc
aattcgatgcagccgggtttcaacgactcgggctgggcgcaggtcggtgtcccgcagacg
ccgtcggataacgacaccttcctgaactggaggtcgggcggcgatcagggatacctgacc
ggcaatatcaactggtatcgcaagcacttcacgctcgatccgtcctttgcgaaccgcaag
atctatatcgagttcgagggcgcgcatacgggtgcgcaggtctatatcaacggcacgttg
attcgcggcaatagccagatcaaccgcgacgcgacgcacgtgctcggcttcattccgttc
atcgtcgatatcacgaactatgtgaaattcgacggctcggacaatgtactggccgtcaag
gttgcgcgcggcgacaagttcttcgagtcacccgatttcgcgggcgcattccgttttggc
caggacgatacgggcctgttccgtccggtgtggatgcacatcacggaccgcgtgcacatt
cccgagaacatttacgcggtactcaatacgtggggcacgtatgtcgcgacggttgcggcg
agcccatcgtcggcgacgatccgtgtgcagaccaacgtgctgaacgagtactcgacggat
cagaaggtgacgttgacgacgcagatcgtcgacgcagccggcgccgtcgtggtcaccgcg
caggatacgcgcaccgtgcctgccaacgtgcagccgggcttgcagcccacactgttcgat
caggtgctgacggtttccaatccgaacctctggtatccgaacaacagcatttacggcaag
ccgtatctgtaccgcgtgattcactccgtcagcatcgacggcgtggtcgtcgatacgacg
gaaagcccgctcggcatccgcacgatcacgtgggaccagaacttcccgatcatcaacgga
catccgcactatctgtggggcgcgtcgggccgttacgactatccggcgctcggctcggcc
gtgccgcccgagctgcaatggaaagacctgagcctgctcgcgcaggcgggcggcagtctg
tatcgtccgggtcattcgagccagggccgcgattttctcgatgccgccgacgcctacggc
gtgatgatggttcagccgagtggcgaaggcgagggcggcttcgccgtcatctgcacggcg
cagactgctcccgacgtcaagtgcatgacgcagaacaacgtcacgctgaagaccgaactg
catcgcgacatgatcgttcatgatcgcaaccatccgtccgtgctcgcatgggaagccgat
aacggcgcgaccgacacggccttcgcgcaatcgctgaaagcgctgtcgcaagtgtgggac
cccatcaacacgcgcgcccaggcggaccgcacgccgaatccgaacaacggcgacattctc
ggctgcagcggcaacggctgcgacatcaacgtcaagaaggactacccgaattcgcccgcc
tggggctcggaatattggggcgacggcgtcggccgatggaagtacgacttcgagctggcg
ttcgccgtcaagtatctgaagacctgggtggcgagcgtggccggcaagtcgtttggtatt
gcgcactggtacctcgccgatacaccaggcgaaatcaacacgcagaccgatggcatcgcg
cccgaggccgtgcgcggcaatggcgcgtcgatgatggacgcgaaccgcctgccgcgcctg
atctactacatctatcaggcggcatggacgccgttcgagatcaagcccgtggtcaagctc
gcgcacacgtggaaccgcgccggcaccgtgaccgtcaacgcgttcagcaactgtcccgca
gtgcggctgcgcctgaacggcgagctgatcggcggcgaccaggtgccgaatccgacctcg
atggacccgaccgatctcacgcagaacaccacgtcgctgccgacgcaggtgcattgggac
aacatcaagtgggcgccgggcacgctgacggcggagtgtctcgacaacaaccgccaggtc
gcggcatatgactcgctggtgacggcaggtcccgccgaccatatcctgttgacggtcgaa
cccgaactcgtgaagccgagcggcgaatcgttcgcgctgactgcgaacggcacggatgcc
gccgtcatcacggcgacggtcgtcgatgcgaacaacgttcgcgtgccggacgcatcgcag
actttgacgttcagcgtcagcggccccggcacatatcgcggcggctccgaccatgacgtg
acgccgaaccagccgctgtcgtatcacgcgccgggcgatccgaacctgtcggtcgaaggc
ggcatgacgcgtatcgcggtcaagacgcagttcacgccgggtgccgtcacggtgacggcg
acatcgcccggtctgggcagcggcaccgcgacgttcaacgtcgtgccgaccagcgcgcag
caaaccttcaacggcaatgcgctggtagtcggtccgcagccgcctagcgcgctgaagatc
atcacgcaaccgtccgaccagcgtgtcacgcaaggccagagcgggcagttctacgtgctg
tcggcgggcgcggcgcccatcagctatcaatggatgaaaaacggcgcggcgattcccggc
gcgaccggctacacgtacacgacgcctgctgtacagacgagcgacgacggcgtcacctac
agcgtcgccgtgcgcaacgccaacagcagcgtcacgtcgaacgccgcgcgcctgacggtc
gtgcagccggctgcgccgaccatcacgacgcaaccgctgtcgctgagcatcaccagcggc
cagagcgcggaattcaccgtgctcgcggcgggctcgcccgtgctgtcgtatcagtggctg
aagaatgacgagcccattcccggcgcgaaccagccggtgtacgacacgcccgcgacgcag
acctcggatagcggttccgtctacaaggcggtcgtgaccaacagcgcgggcacgatcacg
tcggcgggcgcaacgctgacggtgagcgtcgcgacgccgcccgtcatcgtgtcgcaaccg
cacagccagagcgtgccgtttggtcagagcgtgaccttcaacgtgctcgcgagcggctcg
gcgccgctgaagtatcaatggaccaaggacggcaagccgtacggcacgaactcggcgagc
atcgtcattgcgtcggcgcagggcagcgacggcggcaactacgccgtcaccatcaccaac
agcgcaggcagcgtcacgagcgacccggccacgctgacggtgagcggcgcggacaacagc
aacctcgcgctcaacgcgaaggcgatgtcgagcagcgaccagaacggcggcctgaaggcg
cagtacgcagtcgacggctcggtcgcatcgcgctggtcgtcggcgccggagatcgatcct
tcgtggatcacggtcgatctcggctccatccagaccttcaacaaggtcgtgctgatgtgg
gaaaacgcggctgcgtcggcctacaagcttcaggtatcgaacgacaacagcaactggacc
aacgttctgccgaacgaccagatcatcgcgggtcacggcggcacggaaacgacggtgttc
ccgagcacgtcggcgcgctatgtccgcatgctcggcctgcagcgcaccacgcagtatggc
tattcgctgttcgagttccaggtcttcgacgcaccgcaatgcggcagcgagaccgagcgt
ttcacgttgctgggcgcaaagccgggcacgtggaattcgacgatcgcaggtctgccgtcg
ggcccgtacgtgccgaatgtgaaggacaacgtcagcggcctcgtctggcagcagtactac
acgacgttcccgaatcagggcgcgcagttcacgcagacggtcgcgaagcagtattgcgcg
gctatcggcatgcgcctgccgacgcagaacgaagcattgacggtggctcgctcgaacttc
gcatcgtgcgcgttcccggctccgtggggcacgtggaccacgacgggtgtgccgaatgcg
tcgacgcaggcgtatctggcgttctcgtcgggtcagtcggttcccggcatcatcgacaac
acgccgggctggtcgctgtgcgtgtcgggcaatacggccgatgcgcccgtgatctcggcg
caaccggcgagcgtgaaggtcagcgaagggcaagcggcgcagttctcggtgggcgtgacg
ggcacgggaccgttcagcttccagtggatgcgcggcacgacggtggtggcgatcacgacc
aatccgacgtacacgacgccgccgaccacggtggcagccgataacggcgctgcgtacagc
gtcgtggtcaccaatggcggcggcagcgcaaccagcgccacggcaatcctgacggtgacg
gcagcaacgggcggcgatggcggtaacggcggtgatggcggcaacggtggcgatggtggc
aatggtggtaatggcggtgacggtggtgacggcggcaatggcggtgtgccgagcgccaac
ctcgcgcgcggcaaggtcgcgacgtcgagcggcgtgcaggacgaaggctatgcgccgacg
aatgccgtcgacggtaacctcggctcgcgctggtcgtcggacttcaacgacgacgcgtgg
atcacggtcgatctcggccagcagacgcagttcgaccgcgtcgtgctgaactgggagaac
gcttacggcaaggcctatctgattcaggcgtcgaacgataaccagacgtggacgaacatc
atcccgcaacgtgccggcgcgggcggtgtcgaggatatttcgctgcctgtcacgaatgct
cgctatgtccgcatgcagggcgtcaagcgcgcatcgcagtacggttattcgctgttcgag
ttcgaggtgtacaactcggcggcgacgccgaagctgacggtcacggcgagcagcagcgcc
aacggcacgatcagcccgtcgggtgcagtcggcgtgatccagggtggctcgcagacgttc
actgcgctgccggcagcgggctacggcgtgggttcgatgaccgtggatggcaagaacctc
ggcgtgcaatcgacgtacacgttcaccaacgtcacggcggagcacagcatcagtgtgaac
ttcgtgccgttgtccgcgagcgtgaatctggcgctgaaccggccggccacgtcgagcggc
gatgagaacgacaacacgccgcccacgctggccgtcgatggcaacacgggtacgcgctgg
tcgtcgaagttcatcgacccgtcgtggatcatgatcgatctcggttcggagcagaccttc
aaccgcgtggtgctgaactgggagaacgcgcacgcgatcgcgtatcagatccagacctcg
cacgacaacgtcgactggtcgaacaccgtctacacggcgacggacagcaagggcggcgtg
gaagacctgtcgttcccggccacgaccgcgcgttacgtgcgcctctacggcacgaagcgc
tcgacggactacggctactcgctgttcgagttcggtgtgtacaacaacgtgtcgtcgacg
cagcgcgcgcgtcagtaa
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