Paraburkholderia sp. 22B1P: PBP221_84810
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Entry
PBP221_84810 CDS
T10680
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pazz Paraburkholderia sp. 22B1P
Pathway
pazz00521
Streptomycin biosynthesis
pazz00523
Polyketide sugar unit biosynthesis
pazz00525
Acarbose and validamycin biosynthesis
pazz00541
Biosynthesis of various nucleotide sugars
pazz01100
Metabolic pathways
pazz01110
Biosynthesis of secondary metabolites
pazz01250
Biosynthesis of nucleotide sugars
Module
pazz_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pazz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PBP221_84810 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PBP221_84810 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
PBP221_84810 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PBP221_84810 (rfbB)
00525 Acarbose and validamycin biosynthesis
PBP221_84810 (rfbB)
Enzymes [BR:
pazz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
PBP221_84810 (rfbB)
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Ortholog
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
RmlD_sub_bind
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
BEU28341
LinkDB
All DBs
Position
p22B1P2:349620..350645
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AA seq
341 aa
AA seq
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MRYTPTTLLVTGGAGFIGSNFVHHMLRSEPAVRIVNLDLLTYAGTLDNLSDLPAPDRHVF
VHGDICDSSLVTQLFNEHRIDTVMHFAAQSHVDRSITHPGEFVRTNVNGTFTLLEAARAA
WLSTKERDPLEVARTRRFHHISTDEVFGSLSPNDPPFAETTPYTPNSPYSASKAASDHLV
RAYFHTYGLPVVTTNCSNNYGPRQHGEKFIPTVIRNCIEGKRIPVYGDGQNIRDWLYVED
HCRALHRVLTHGQLGETYNIGGCNEWRNNDVVALICRLFDERIPGRAPHERLIEFVNDRV
GHDRRYAIDNAKITDALDWGPAEDFESGLAKTIDWQLGWTQ
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcgctatacgcctacaaccctgctcgtgaccggcggcgccggcttcatcggatccaac
ttcgtgcaccacatgctgcggtcggagcctgccgtgcgcatcgtcaatctcgatctgctg
acgtatgcgggcacactcgacaacctgtccgatctgcccgcgccggatcggcacgtcttc
gtgcatggcgacatctgcgattcatcgctcgtcacgcaactcttcaacgagcatcggatc
gacaccgtcatgcacttcgccgcgcaaagccacgtcgaccgctcgattacgcatcccggc
gaattcgtgcgcacgaacgtcaacggcaccttcacgctgctcgaagccgcacgggccgcg
tggctcagcaccaaagaacgcgacccgctggaggttgcgcgcacgcggcgctttcatcac
atctcgaccgacgaagtgttcggctccctgagcccgaacgatccgccattcgccgagacc
acgccctatacgcccaattcgccgtactccgccagcaaggcggcctcggatcatcttgtg
cgagcgtatttccatacctacggtttgcccgtcgtcacgaccaactgttcgaacaactac
gggccgcgccagcacggcgagaaattcattccgacggtgatccgcaattgcattgaaggc
aagcgcatacccgtgtatggcgacggtcagaacattcgcgactggctctacgtcgaagat
cactgccgcgcgcttcaccgtgtgctcacgcacggacagctcggcgagacatacaacatc
ggcggctgcaacgagtggcgcaacaacgatgtcgtcgccctgatctgccggctgttcgac
gagcggattccgggacgcgcgccgcacgaacggctgatcgagttcgtcaacgaccgcgtg
ggccatgaccggcgctacgcaatcgacaacgcaaagatcaccgatgcgctcgactggggt
cccgccgaggacttcgagagcggccttgcaaagacgatcgactggcaactgggatggaca
caatga
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