Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a1012
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Entry
PSEBR_a1012 CDS
T01472
Name
(GenBank) putative ABC transporter, periplasmic component; substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSEBR_a1012
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pba02000
]
PSEBR_a1012
Transporters [BR:
pba02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PSEBR_a1012
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GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
AEA67185
UniProt:
F2KCQ3
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All DBs
Position
complement(1282463..1283614)
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AA seq
383 aa
AA seq
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MYAHKTVLLSAITTALLTSVSLQAAEPLKAVGAGEGQLDIVAWPGYIERGESDKAYDWVT
GFEKETGCKVNVKTAATSDEMVSLMTKGGYDLVTASGDASLRLIAGKRVQPINTALIPNW
KNLDPRLKDAPWYVVNQQTYGTPYQWGPNVLMYNTDVFKQAPVSWSVLFSAQNLPDGKPN
KGRVQAYDGPIYIADAALYLKTAKPELGIKDPYQLDEAQYKAVLELLRAQQPLIHRYWHD
TTVQMSDFKNEGVVASGAWPYQVNGLMNEKQPIASTIPKEGATGWADTTMLHAEAKHPNC
AYKWMDWSLQPKVQGDVAAWFGSLPAVPAACKGSELLGAEGCKTNGFDQFDKIAFWKTPQ
AEGGKFVPYSRWTQDYIAIMGGR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcgcacaagaccgtattgctcagtgcaatcaccacggcgctgctgaccagcgtc
agcctccaggccgccgaaccgctcaaggccgttggcgccggtgagggccaactggatatc
gtcgcctggccgggttacatcgaacgcggcgaaagcgacaaggcctacgattgggtcacc
ggtttcgagaaggaaaccggttgcaaggtcaatgtgaaaactgccgctacgtccgacgaa
atggtcagcctgatgaccaagggcggctacgacctggtcaccgcctcgggcgacgcctcg
ttgcggctgattgccggcaagcgcgtgcagccgatcaacaccgcgctgatccccaactgg
aaaaacctcgacccgcgcctcaaggatgcaccgtggtacgtggtcaaccagcagacctac
ggcaccccgtaccagtggggcccgaacgtgctgatgtacaacaccgacgtgttcaagcag
gcgcccgtcagttggagcgtgctgttcagcgcccagaacctgcccgacggcaagccgaac
aaaggccgcgtgcaagcctacgatggcccgatctacatcgccgacgcggcgctctacctc
aagaccgccaagcctgagctgggcatcaaggacccataccaactcgacgaagcccagtac
aaggccgtgttggaattgctgcgggcccagcagccgctgatccaccgctactggcacgac
accaccgtgcagatgagcgatttcaagaacgaaggcgtggtggcctctggcgcctggcca
tatcaggtcaacggcctgatgaacgagaagcaaccgatcgcctcgaccattccgaaagaa
ggcgccaccgggtgggccgacaccacgatgttgcacgccgaggccaagcaccccaactgc
gcgtacaagtggatggactggtcgctgcaaccgaaagtccagggtgacgtggcggcgtgg
ttcggctcgttgccggcggtgcccgcggcgtgcaagggcagcgaactgctgggcgccgaa
ggctgcaagaccaacggtttcgatcagttcgacaagatcgccttctggaaaaccccacag
gccgagggcggcaagttcgtgccgtacagccgctggacccaggactacattgcgatcatg
ggcgggcgctaa
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