Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a1253
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Entry
PSEBR_a1253 CDS
T01472
Name
(GenBank) putative Transcription factor, LysR family
KO
K05596
LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pba03000
]
PSEBR_a1253
03036 Chromosome and associated proteins [BR:
pba03036
]
PSEBR_a1253
Transcription factors [BR:
pba03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PSEBR_a1253
Chromosome and associated proteins [BR:
pba03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
PSEBR_a1253
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_AsnC-type
HTH_34
Cro
HTH_24
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AEA67433
UniProt:
F2KCZ3
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All DBs
Position
1545376..1546275
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AA seq
299 aa
AA seq
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MFDYKLLSALAAVVEQAGFERAAQVLGLSQSAISQRIKLLEARIGQPVLVRATPPAPTEI
GRRLLNHVQQVRLLERDLQSLVPALDEEGLPERLRIALNADSLATWWAAAVGDFCAEHHL
LLDLVVEDQTVGLKRMRAGEVAACVCASERPVAGARSVLLGAMRYRALASPAFIARHFPD
GVRADQLAHTPALVFGPDDFLQHRYLASVGVEGGFEHHLCPSSEGFIRLAEVGLGWGLVP
ELQVREQLERGVLVELLADKPIDVPLYWHHWRNGGQLLGLLTEQLIRSSRQWLVPWEAQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgttcgactacaaattgctttctgccctggctgccgtggtcgagcaggccggtttcgaa
cgcgcggcccaggtgttgggtttatcgcaatcggccatttcccaacggatcaaactgttg
gaagcgcgcatcggccagcccgtgctggtacgtgccacgccgccggcacccacggagatc
ggccgacggctgctcaatcacgtgcaacaggtgcgtctgcttgagcgcgacctgcaaagc
ctggtgccggccctggatgaagagggtctgccggaacgtttgcgcatcgccttgaacgcc
gacagcctggcaacctggtgggcggcagccgtgggcgatttctgcgccgagcatcacctg
ttgctcgacctggtggtggaggaccagaccgttggcctcaagcgcatgcgcgccggtgaa
gtggcggcgtgtgtctgcgccagcgaacgtccggtggcgggcgcccgcagcgtgttgctg
ggagcgatgcgctaccgggcgctggccagcccggcgttcattgcccggcatttccccgac
ggggtacgggccgatcaactggcccatacgccggcattggtgtttggcccggatgacttc
ctgcagcaccgctaccttgcgtccgtgggcgtggagggcggtttcgagcaccatctgtgc
ccctcgtccgaaggtttcattcgtcttgctgaagtcgggctgggctgggggctcgtgccg
gagctgcaagtgcgcgaacagctggagcgaggcgtgctggtggaattgctggcagataaa
ccgatcgatgtgccgctgtactggcatcattggcgcaatggcgggcagttgctcggcttg
ttgaccgagcagttgatccgctcctcccggcagtggctggtgccttgggaggcgcagtag
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