Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a1326
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Entry
PSEBR_a1326 CDS
T01472
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSEBR_a1326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pba03400
]
PSEBR_a1326
Enzymes [BR:
pba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PSEBR_a1326
DNA repair and recombination proteins [BR:
pba03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PSEBR_a1326
Prokaryotic type
PSEBR_a1326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AEA67513
UniProt:
F2KE36
LinkDB
All DBs
Position
1630256..1630948
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AA seq
230 aa
AA seq
DB search
MTADDRIKLEPSWKQALRAEFDQPYMAELREFLRREYAAGKEIYPPAPLIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIFKELKRDLNIDIPNHGYLQSWA
DQGVLLLNTTMTVERANANAHAGKGWQHFTDRVIEVVSEHQQNLVFLLWGAHAQGKQKLI
DATKHLVLTSVHPSPLSAYRGFLGCGHFSRANKFLEQHGEAPIDWRLPPV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgacgaccgtatcaaactcgaaccgagctggaagcaggcactgcgtgccgag
ttcgaccagccctacatggcagagttgcgcgaattcctgcgtcgggaatacgccgccggc
aaggagatttatccaccggccccgctgattttcaatgccctcaattccacgccgctggac
aaggtcaaggtggtgattctcggccaggacccgtaccacggcccgggccaggcccatggc
ttgtgcttctcggtacagccgggtgtgccagcgccgccgtcgctggtaaacatcttcaag
gaattgaagcgcgacctgaacatcgatattcccaaccatggctatctgcaaagctgggcc
gaccagggcgtgttgctgctcaacactaccatgaccgtggagcgcgccaacgccaacgcc
cacgcaggcaagggctggcagcacttcaccgaccgagtcatcgaagtggtcagcgaacac
cagcagaacctggtcttcctgctatggggcgcccatgcccagggcaagcagaagctgatc
gacgccaccaagcacctggtgctgacttcggtccacccgtcgccgttgtcggcttatcgt
ggttttctggggtgcgggcatttcagtcgggccaacaagttcctcgaacaacatggcgag
gcgcctatcgattggcgattgccgccggtttga
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