Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a1430
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Entry
PSEBR_a1430 CDS
T01472
Name
(GenBank) Putative ABC transporter, ATP-binding/permease components
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSEBR_a1430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pba02000
]
PSEBR_a1430
02044 Secretion system [BR:
pba02044
]
PSEBR_a1430
Transporters [BR:
pba02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PSEBR_a1430
Secretion system [BR:
pba02044
]
Type I secretion system
Adhesin protein transporter
PSEBR_a1430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_33
Peptidase_C39
RTX
AAA_29
AAA_22
MMR_HSR1
DUF87
nSTAND3
EMP70
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AEA67625
UniProt:
F2K900
LinkDB
All DBs
Position
complement(1743224..1745374)
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AA seq
716 aa
AA seq
DB search
MEPATLGADPRLNFDDPLLDGLLILCKLHGATVSRASLSAGLPMAHQRLSLDLLPRAAAR
ASLQARLLRRELADISPLNLPVMLILAGGRCAVLRRWGEDGKALILPSEADGGEQWVSRK
ELNLDYSGQALFARPRHELEDLRAPLVPRVEAWFRDTLKLSRWLYSDAILASFLINLLGL
MVPLFVMQTYDRVVPNQATSTLWVLAVGLLIGTGFELVLRVVRAHLLDTAGKKTDVILSA
TLFERITGMAMKAKPVTIGGFAQSIHDFQGLREFLTAVTLTSLIDLPFALLMLVVIGLLG
GWLVVIPVVAFPITIVFAMIIQARLRDTVEKSLALGAQRQALLIETLGGLETLKACSAES
ERQHQWESTHGALTRLDSHARNLSALATNGTLFLQQLAGMATIVAGVYSIIAGNLSVGAL
VATYMLGSRVLAPLGQIAGLITRYQQAQLTMRSTDALMALPQERDAKQRPLDRTQLQGAL
DVSGVTFHYNGQSTPALANISFSLKPGERVGIIGRSGSGKSTLARLVMGFYAPEEGQLLL
DGLDLRQLDVADLRQQIGYVAHDLPLLAGSLRDNLTLGARYISDARMLEVAELTGVTELA
RQHPQGFDRPVGERGQLLSGGQRQAVLLARALLLDPPILLLDEPTSAMDNSSEDVLRQKL
HTHVQGKTVLLVTHRTSMLSLVDRLVVLDNGRIVADGPKEAVIDALRKGRVGSAAV
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgcaacccttggcgccgatccgcgcctgaatttcgatgatcccttgctggac
ggtctgttgatcctctgcaaactccatggtgcgacggtcagccgcgccagcctcagcgcc
gggcttcctatggcgcaccaacgcttgagcctggacctgctgccacgcgcagcggcccgg
gcaagcttgcaggcgcgactgttgcgtcgtgagctggcggatatctcgcccctgaacctg
ccagtgatgctgatcctggcggggggccgctgtgcggtactcaggcgctggggcgaggat
ggcaaggcgctgatcctgcccagcgaagccgacggcggcgagcagtgggtcagccgcaag
gaactgaacctcgactacagtggccaggccttgttcgcccggccgcgccatgaactcgaa
gacctgcgcgcgcccctggtgccgcgggtcgaggcgtggtttcgcgacaccttgaaactg
tcgcgctggctgtacagcgacgcgatcctggcgagtttcctgattaacctgctgggcctg
atggtgccgctgttcgtcatgcagacctacgaccgcgtggtgccgaaccaggccacgtcg
accttgtgggtgctggccgtggggttgttgatcggcaccggcttcgaactggtgttacgg
gtagtgcgcgcccatctgctggacaccgccggcaagaaaaccgacgtgattctctccgcc
accctgttcgagcgcatcaccggcatggcgatgaaggccaagccagtgaccatcggcggc
ttcgcccagagcatccacgacttccagggcctgcgcgaattcctcacggcagtgaccctc
accagcctgatcgacctgcccttcgccctgctgatgctggtggtgatcggcctgctgggt
ggctggctggtggtgattccggtggtggcgtttccaatcaccattgtcttcgcaatgatc
atccaggcgcgcctgcgcgacaccgtggaaaaaagcctggcgctgggcgcccagcgccag
gcactgctgatcgaaaccctcggcggcctggaaaccctcaaggcctgcagcgccgagagc
gagcgccagcatcagtgggaaagcacccacggcgccctcacccgcctggacagccatgcg
cgcaatctgtcggcactggcgaccaacggcacgttgttcctgcaacaactggcgggcatg
gcgaccatcgtcgccggggtctacagcatcatcgccggcaacctcagcgtcggcgcgctg
gtggcgacctacatgctcggcagccgagtactggcgccgctggggcagatcgccgggctg
atcacccgttaccagcaagcccagctcaccatgcgcagcaccgatgccttgatggcgctg
ccccaggaacgcgatgccaaacaacggccgttggatcgcacccagttgcagggcgcgctg
gacgtcagtggcgtgaccttccactacaacggccagagcactccggcgctggccaatatc
agcttcagcctcaagcccggcgaacgggtcgggatcatcggccgcagtggctcgggcaag
agcaccctggcgcgcctggtgatgggtttctacgcgccggaggaaggccagttgctgctc
gacggcctggacctgcggcaactggacgtcgccgacctgcgccaacagatcggctacgtc
gcccatgacctgccgctgctggccggtagcctgcgggacaatctcaccttgggcgcccgc
tacatcagcgacgcgcgcatgctggaagtggcggaactgaccggtgtcaccgaactggcg
cgccaacatccccaaggtttcgaccgcccggtgggcgagcgcgggcaactgctctccggc
ggccaacgccaggccgtgctactggcccgggccttgctgctcgacccgccgatcctgctg
ctggacgaacccaccagcgccatggacaacagcagcgaagacgtcttgcggcaaaagctg
catacccatgtacagggcaagaccgtgctgctggtcacccaccgcacctcgatgctgagc
ctggtggaccgcctggtggtgctggataacggccggatcgtggccgatggcccgaaagag
gcggtgatcgatgcgctgcgcaagggccgggtgggctccgcggcggtatag
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