Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a1548
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Entry
PSEBR_a1548 CDS
T01472
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) (DNA gyrase subunit A)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pba03032
]
PSEBR_a1548
03400 DNA repair and recombination proteins [BR:
pba03400
]
PSEBR_a1548
Enzymes [BR:
pba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PSEBR_a1548
DNA replication proteins [BR:
pba03032
]
Prokaryotic type
DNA Topoisomerases
PSEBR_a1548
DNA repair and recombination proteins [BR:
pba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PSEBR_a1548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AEA67745
UniProt:
F2KEA9
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Position
1883298..1885961
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AA seq
887 aa
AA seq
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MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSTVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA
VVAMVERAGADSCRPENLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSATRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVEEYTEGHYIFMATANGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSQILTASARGYGKRTAISEFPEYKRGGQGVIAMVSNDR
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVAEVSSLGRNTQGVTLIKLASDETLVGLERV
QEPSEVEGEELEGEEGVAFEGTLGADVDDVTGDQPLDAAADEEEPQD
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcaatgagcgtaatcgtcgggcgggcgctgccggatgcgcgcgatggc
ttgaagcccgtgcaccggcgcgtgctgttcgcgatgagcgagctgggcaacgacttcaac
aagccgtacaagaaatctgcccgtgtcgtcggcgacgtgatcggtaagtatcacccccac
ggcgacactgccgtgtacgacaccatcgttcgtatggcgcagccattctccttgcgctac
ctgctggtagacggccagggcaacttcggttccgtggacggcgacaacgccgcggccatg
cgatacaccgaagtgcgcatgaccaagctggctcacgaactgctggccgacctgcacaag
gaaaccgtggactgggtgccgaactacgacggcaccgaaatgatcccggcggtcatgccg
acccgtatcccgaacctgctcgtcaacggctccagcggtattgccgtgggcatggcgacc
aacatcccgccgcacaacctcggtgaagtcatcgacggttgcctggccctcatcgacaat
cccgagctgaccgtcgatgagctgatgcaatacatcccgggtccggacttcccgaccgcc
gcgatcatcaacggtcgggccggcatcatcgaagcctaccgcaccggccgtggccgcatt
tacatgcgcgcccgctccaccgtcgaagacatcgacaaggtcggtggtcgccagcagatc
gtcatcaccgaactgccgtaccagctgaacaaggctcgcctgatcgagaagatcgccgag
ctggtgaaagagaagaagctcgagggcatcaccgagctgcgtgacgagtccgacaaggac
ggcatgcgcgtcgtgatcgagttgcgtcgtggcgaagtgcctgaggtgatcctcaacaac
ctctacgcccagacccagttgcaaagcgtgttcggcatcaacatcgttgcgttgatcgac
ggccgtccgcggatcctgaacctcaaggacctgctggaagccttcgtgcgtcaccgtcgc
gaagtggtcacccgtcgtaccgtattcgagctgcgcaaggctcgcgagcgtggtcacatt
ctcgaaggccaggccgttgccctgtcgaacatcgacccggtgatcgccttgatcaaggcc
tcgccaacgccgtcggaagccaaggaagcgctgatcagcaccccttgggagtcctccgcg
gtggtggcaatggtcgagcgcgctggcgccgactcgtgccgtccggagaacctcgacccg
cagtacggcctgcgcgaaggcaagtacttcctgtccccggaacaggcgcaagccatcctg
gaactgcgcctgcaccgcctgaccggcctggagcacgagaagctgctggccgagtaccag
gaaatcctcaaccagatcggcgagctgatccgcatcctcaacagcgccacgcgcctgatg
gaagtgatccgcgaagagctggaagtgattcgtgccgagtacggcgacgtgcgccgcacc
gagatcctcgatgcgcgcctggacctgaccctgggtgacatgatcccggaagaagagcgc
gtggtgaccatttcccacggcggctacgccaagacccagccgctggctgcctaccaggcc
cagcgtcgcggcggcaaaggcaagtcggcgaccggcgtcaaggacgaggactacatcgct
cacctgctggtcgccaacagccacaccacgctgctgctgttctccagcaaaggcaaggtg
tactggctcaagacctacgaaatcccggaagcgtcccgtgccgcacgtggccgtccgctg
gtcaacctgttgccgctggacgatggtgaatacatcaccaccatgctgccggtggaggaa
tacaccgaaggtcactacatcttcatggctaccgccaatggcaccgtgaagaagaccccg
ctggaatccttcagccgccagcgcagcgtcggcctgatcgccctggagctggacgaaggc
gacgtactgatttccgccgccatcaccgacggcgagcgtgaggtcatgctgttctccgac
ggtggcaaggtcactcgcttcaaggaatccgacgtgcgtgccatgggccgtaccgcccgc
ggtgtgcgcggcatgcgcctgccggaaggccagaagctgatttccatgctgattcccgaa
gaaggcagccagatccttaccgcttcggcgcgtggttatggcaaacgcacggccatcagc
gagttccctgagtacaagcgtggtggccagggcgtgatcgccatggtcagcaacgatcgt
aacggtcgtctggttggcgctgtccaggtgctcgatggcgaggagatcatgctgatctcc
gaccagggtaccctggtgcgtacacgagttgccgaagtctcgagcctgggtcgtaacacc
cagggcgtgacgctgatcaagctggccagcgacgaaacgctggtagggcttgagcgggtg
caggagccatcggaagtcgaaggcgaggagctggaaggcgaggaaggcgtggcgttcgag
ggcaccctgggtgccgatgtcgacgacgtgaccggcgaccaaccgctcgacgctgccgca
gacgaagaagaaccgcaggactaa
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