Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a1555
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Entry
PSEBR_a1555 CDS
T01472
Name
(GenBank) putative Transcription factor, unclassified
KO
K05788
integration host factor subunit beta
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pba03032
]
PSEBR_a1555
03036 Chromosome and associated proteins [BR:
pba03036
]
PSEBR_a1555
03400 DNA repair and recombination proteins [BR:
pba03400
]
PSEBR_a1555
DNA replication proteins [BR:
pba03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PSEBR_a1555
Chromosome and associated proteins [BR:
pba03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PSEBR_a1555
DNA repair and recombination proteins [BR:
pba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PSEBR_a1555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AEA67753
UniProt:
F2KEB7
LinkDB
All DBs
Position
1894868..1895164
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AA seq
98 aa
AA seq
DB search
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRV
GRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEEEGDEL
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcggagttgatcgaacgaattgtcacccatcaagggctactctcatccaag
gatgtggagctggccatcaagactatgcttgagcagatgtcccagtgcttggcgactgga
gatcgcatcgagattcgcggtttcggcagtttttccttgcattaccgcgctccgcgggta
ggtcgcaatccaaagaccggccagtccgtcagcctagacgggaagttcgtcccccatttc
aagccgggtaaagagctcagggatcgggtgaatgaggaggagggggatgagctctga
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