Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a1718
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Entry
PSEBR_a1718 CDS
T01472
Name
(GenBank) Coproporphyrinogen dehydrogenase (oxygen-independent coproporphyrinogen III oxidase)
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba00860
Porphyrin metabolism
pba01100
Metabolic pathways
pba01110
Biosynthesis of secondary metabolites
pba01240
Biosynthesis of cofactors
Module
pba_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PSEBR_a1718
Enzymes [BR:
pba01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
PSEBR_a1718
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Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
AEA67927
UniProt:
F2KEL1
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Position
complement(2103368..2104750)
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AA seq
460 aa
AA seq
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MLDTICWDSNLIRRYDLAGPRYTSYPTAAQFGSQVGTFDLLHALRDSRKALRPLSLYLHI
PFCANICYYCACNKVITKDRGRAHAYLQRLEQEIQLIGCHLDPTQRVEQLHFGGGTPTFL
SHDELRQLMAKLRQHLNLLDDDSGDYGIEIDPREADWSTMGLLRELGFNRVSIGLQDLDP
AVQRAVNRLQSLEETRAVVEAARTLQFRSINIDLIYGLPKQTPENFARTVQEVIHLQPDR
LSVFNYAHLPERFMPQRRINSQDLPTPEQKLAMLQGTIEQLTAAGYRYVGMDHFALPDDE
LAIAQEEATLQRNFQGYTTHGHCDLIGLGVSAISQIGDLYCQNSSDLNHYQNTLADGQLA
TSRGLICNADDRLRRAVIQQLICHFHLPFAEIEQTFNIDFRGYFAPQWPQLQAMAADGLI
ELDDTHIRVLPAGRLLVRSVCMVFDAYLDQHNRQRFSRVI
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacaccatttgttgggactcaaatcttatccgccgttacgacctggcgggacca
cgctacacctcgtaccccacggcggcgcagttcggcagccaggtgggtaccttcgacctg
ctccacgccctgcgcgacagccgcaaggccctgcggccgctgtcgctgtacttgcacata
ccgttctgcgcgaacatttgctactactgcgcctgcaacaaggtcatcaccaaggaccgc
ggccgcgcccacgcctacctgcaacgcctggaacaggaaatccaactgatcggctgccac
ctggaccccacccagcgcgtagaacagttgcactttggcggcggtaccccgacgttcctc
agccacgatgagctgcgccaactgatggccaagctgcgccagcacctgaacctgctggac
gacgattctggcgactacggcatcgaaatcgaccccagggaagccgactggtcgaccatg
ggcctgttgcgcgaactgggtttcaaccgggtcagtatcggcctgcaagaccttgatcca
gcggtgcagcgggccgtcaatcgcctgcaaagcctcgaggaaacccgcgcagtggtcgaa
gccgcccggaccttgcaattccgctcgatcaacattgacctgatctacggcctgcccaag
cagaccccggaaaacttcgcccgcaccgtccaggaagtcatccacctgcaaccggaccgg
ctctcggtgttcaactacgcccacctgccggaacgcttcatgccccagcggcgcatcaac
agccaggacttgccgaccccggagcagaaactggcgatgctgcaaggcaccatcgaacaa
ctgaccgccgccggctaccgctacgtcggcatggaccacttcgccctgcccgacgacgaa
ctggcaatcgctcaggaagaggccacgttgcagcgcaacttccagggctacaccacccat
ggccattgcgacctgatcggccttggcgtgtcagccatcagccagatcggcgatttgtat
tgccagaacagcagtgacctgaaccattaccagaacaccctcgccgacgggcaactggcg
accagtcgcgggctgatctgcaatgccgacgaccggttgcggcgcgcggtgatccagcag
ttgatctgtcatttccacctgcccttcgccgagatcgagcaaaccttcaacatcgacttt
cgtggttacttcgcgccgcaatggccgcaattgcaggccatggccgcggatgggctgatc
gagctggatgacacccatatccgggtattgcccgccgggcgcctgctggtgcgatccgtg
tgcatggtattcgatgcctacttggaccagcacaatcgccaacgcttctcccgagtcatt
tga
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