Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a2007
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Entry
PSEBR_a2007 CDS
T01472
Name
(GenBank) DNA topoisomerase (DNA topoisomerase III)
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pba03032
]
PSEBR_a2007
Enzymes [BR:
pba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PSEBR_a2007
DNA replication proteins [BR:
pba03032
]
Prokaryotic type
DNA Topoisomerases
PSEBR_a2007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
zf-C4_Topoisom
Toprim_4
Toprim_2
DUF2607
Zn_ribbon_recom
Ogr_Delta
Motif
Other DBs
NCBI-ProteinID:
AEA68245
UniProt:
F2KF19
LinkDB
All DBs
Position
complement(2455860..2457875)
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AA seq
671 aa
AA seq
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MRLFLCEKPSQGKDIARVLGALRRGNGCYNGPGISVTWCIGHLVEAAPPEAYDERFKRWS
LDQLPIVPTNWRVDVKADTAAQYKVVKQLLAKTTELVIATDADREGEMIAREILELCHYQ
GSIRRLWLSALNEASIRKALTGLRPADETERLYHSALARSRADWLVGMNMSRLFTLLAQR
SGHHGVLSVGRVQTPTLRLVVDRDREIERFVPMHYWGIDVHLSYQEQLFLAQWVAPDCAT
DDAGRCIRQAMAQQALQSVRQAQRAQVLDMQMDRIREAPPLPFDLGTLQEVCSRRFGLGV
QQTLEIAQSLYETHKATTYPRSDSGYLPESMWDEASTVLDALIISDPSVEALVQSVNRQQ
RSRAWNDSKVSAHHGIIPTLEPFQIEALSEKERAVYELIRAHYLAQFLPHHEYDRSCALF
TCGGHTLRAHGKQIVASGWHRALAPDSTTSDDDSAQRNQILPPLSTGSDCNVSQVELRTL
KTQAPKALTQGELIKAMKGVAKLVTDPRLKRTLKETTGIGTEATRANIISGLLNRGYLYM
KGRSVRASDAAFTLIDAVPAAIADPATTAIWEQAFDMIENGQMTLDCFIAKQTAWITQLV
EHYRTTTLLIHTPGGPNCPLCGASMRQRQGKHGSFWSCSRYPECKGALPVVTKTTLAPRR
RKPRHSKPKGY
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgcgactttttctctgtgagaaaccctcccaaggcaaagatattgcccgagtgctaggt
gcgcttcggcgtggtaacggctgctacaacggtccgggcatcagcgtgacctggtgcatc
gggcacctggtagaagctgctcctcctgaagcctacgacgaacgcttcaagcgctggtcc
ctggatcagcttcccatcgttccgactaactggcgcgtggatgtcaaagcggacacggcc
gcccagtacaaggtcgtcaagcagttgttggccaagacgactgaattggtgattgcaacc
gatgccgatcgagagggcgaaatgattgcccgagagatactggaattgtgtcattaccaa
ggctcgatccggcgattatggctgtcagcgctcaacgaggcatcgattcgtaaagcactc
actggtttgcgtccggccgatgaaaccgaacggctgtatcactccgccctcgcccgctcc
cgggcggactggttggtcggtatgaacatgagtcggttatttacgctactggcacaacga
agcggccatcatggcgtgctttcagtaggacgcgtgcaaacgccaacgttacggttggtc
gttgaccgcgatcgtgaaatcgaacggtttgtaccgatgcattactggggtatcgatgtg
cacctgtcataccaagagcagctatttctagcccagtgggtggctccggattgtgctact
gacgatgcaggtcgttgtattcgacaggccatggctcagcaggcacttcaaagtgtacga
caagcccagcgggcacaggtcctcgacatgcagatggaccgcatacgagaggctccacct
ctgcccttcgatctagggacgctacaagaggtttgctcacggcgattcgggctgggtgtg
cagcagacgctggagatcgcgcaatcgctgtacgagacccacaaggccaccacctatccg
cgctccgattcgggatatcttcccgaaagcatgtgggatgaggcatcgaccgtccttgat
gccttgattatcagcgacccaagtgtggaggcgctggttcagtctgttaatcgacagcag
cgctcacgggcctggaatgacagcaaggtcagcgctcaccacggcatcatcccaacgttg
gagccgttccaaatcgaggccctgagtgagaaggagcgggctgtatatgaactgatccga
gcccattacctggctcagtttctgccgcaccatgagtacgaccgtagctgcgcactgttc
acctgtggcggccatacgctgcgagcccacggaaaacaaatcgtagcgtcaggctggcat
cgggcattagcgccagattctacgacgagcgacgacgattcggctcaacgaaaccagata
ttgccgccgctgagcactggtagtgactgcaatgtgagccaggtggaattgagaacactc
aagacgcaagcaccaaaagcgctcacccaaggcgaactgatcaaggctatgaaaggagtc
gccaaacttgtcaccgaccctcggctcaagcgaacgcttaaagagacgacggggatcggt
accgaagcaacccgcgccaatatcatcagcgggttgttgaaccgaggttacttgtacatg
aagggtcgctccgtacgggcatctgacgccgcttttaccttgatcgatgcggtgcccgct
gccattgccgatcctgccaccaccgcgatctgggagcaggctttcgacatgatcgagaac
ggccaaatgactttggactgtttcattgccaagcaaacagcgtggatcacccagttggtg
gagcattataggacgacgactttgctgatccatacacctggtggtccgaactgtcccttg
tgcggtgcatcgatgcgccaacgccaaggcaagcacggttcgttctggtcgtgcagccgc
taccccgaatgtaagggcgcgctacccgtcgtcaccaagacaacgttggcgccccgacgt
agaaagccacgtcactcaaaacccaaagggtactga
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