Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a2180
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Entry
PSEBR_a2180 CDS
T01472
Name
(GenBank) Conserved hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSEBR_a2180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pba02000
]
PSEBR_a2180
Transporters [BR:
pba02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PSEBR_a2180
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
AEA68452
UniProt:
F2KGJ3
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All DBs
Position
2693039..2694247
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AA seq
402 aa
AA seq
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MITLRVLGTSVTLLECLRVRAEQELGIRLVYQVHDVEQAQRIAVMQPDSYDLYDQWFHNV
DFVWPARAIQPIDTRRIALWHEINDLPKRGRLSANDRLGSGSVPSERLFVQHDGSLGSTV
TERISMLPLTHNADSFAYRPERLPEGFRHDNESWGWLLDPAWRARTALQSDAAIGALDAA
LAAQGAGLARFKDIGNMSIEEIDVLADILVRKQREGHFAAFWSDDEEAAQLMLSPSIDIQ
SLWSPTLMRLHRAGVKYRLAVPREGYRAWFGGLSLSRHAQGPVLDAAYAYLNWWLSGWPG
AVMARQGYYIGNPARSRDHLSSAEWDYWYAGQPAREELLGSDGLPLIDIGDVRDGGSYEQ
RMGHIAVWNSVMDEHNYLVRRWGDILRAGAKGSRRPGNGGPC
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatcacactccgcgtccttggcacctctgtgaccttgctcgaatgcctgcgtgttcgt
gcggaacaggagttgggcattcgcctggtgtaccaggtgcacgacgtcgaacaggcccag
cgcatcgcggtgatgcagcccgacagctacgacctgtacgaccagtggttccacaacgtc
gacttcgtatggccggcccgggcgatccagcccatcgatacgcggcgcattgcgttgtgg
catgagatcaacgacctgcccaagcgcggccgcctgtccgccaacgatcggttgggcagc
ggcagcgtgcctagcgagcgcttattcgtgcagcacgatggcagcctcggcagcaccgtc
actgagcgaatcagcatgctgcccttgacccataacgccgacagtttcgcctaccggccc
gagcgcttgcccgagggttttcgccacgacaatgaaagttgggggtggttgctcgacccc
gcgtggcgtgcgcgcactgcgctgcaaagcgatgcggccatcggtgccctggatgctgcg
ctggcggcgcagggcgcggggctggcgcgcttcaaggacatcggcaacatgagcatcgaa
gagatcgatgtgctggccgatattctggtgcgcaaacagagggaaggtcactttgcggcg
ttctggtccgatgacgaggaggccgcgcaattgatgctcagcccgagcatcgatatccag
agcctgtggtcgccgacgttgatgcgcctgcatcgcgccggggtgaaataccgtctggcg
gtacctcgcgagggctaccgcgcctggttcggcggtttgtcattgtcgcgccacgcccag
ggcccggtgctggatgcggcctacgcatacctcaattggtggttgtccggctggcccggc
gcggtgatggcgcgtcagggttactacatcggcaacccggcgcgcagccgcgaccatctg
agcagtgccgagtgggattactggtacgccggtcaacctgcgcgagaggagttgctgggc
agtgatggtttgccgctgattgacatcggtgatgtgcgcgatggcggttcctatgagcag
cgcatggggcacatcgctgtgtggaactcggtgatggatgagcacaactatctggtgcgt
cgctggggcgatattttacgggcgggggcgaaaggctcccgcaggccggggaatggcggg
ccgtgctga
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