Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a2196
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Entry
PSEBR_a2196 CDS
T01472
Name
(GenBank) putative peptide ABC transporter, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSEBR_a2196
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pba02000
]
PSEBR_a2196
Transporters [BR:
pba02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PSEBR_a2196
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AEA68468
UniProt:
F2KGK9
LinkDB
All DBs
Position
complement(2714407..2715927)
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AA seq
506 aa
AA seq
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MGIKGFACSIALMGLISSFPAHAGKANDTLVYASDSEPENISPYHNDLREGVILGRLIWD
NLIYRDPKSGEYKPMLATRWTQVDDTTIDFELRRGVKFHNGDAFTADDVVFTLNYVVSPE
AKVVTVQNVDWIKSAEKTGDYSVRLHLKKPFPPALEYLSNAVPMFPKQYFEKVGLAEFSR
KPVGTGPYKAVSVVAGEGVTMEINKDYFPDSPQGKPHIGHLKFRVIPDAETRLAELMTDG
VDWTWRVTPDQAVDLKGMPNLTVTSGETMRIGFLILDARGTSTENSPMKQLKVRQAINHA
INRNALATQLVGGEAKPLQVACYPGQFGCDTTAATVYNYDPAKAKALLAEAGFPNGFETE
IFAYRDRDYVEAIIGNLRAVGINAKLRYLKYAALRDQQRGGKVPMSFQAWGSFSILDTSA
SAGTWFKGNPDDNIKDPQVQSWLQTADNALDPQLRKDNYRKALQRISEQAYWAPLFNYSM
NYAYTSELAFTSYPDELPRFVQSSWK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcaaaggtttcgcctgcagtattgcgctgatgggcctcatcagcagttttccg
gcgcatgccggtaaagccaacgacaccctggtttacgcttccgacagcgagcctgaaaac
atcagcccctatcacaacgatctacgcgaaggtgtgattctcggccgactgatctgggac
aacctgatctaccgcgatcccaagagcggcgaatacaaacccatgttggccacccgctgg
acacaggtcgacgacaccaccatcgactttgagctgcgcagaggcgtcaaatttcacaac
ggcgacgccttcaccgccgacgacgtggtgttcaccctcaactacgtggtgtcgcccgaa
gcgaaagtcgttaccgtgcaaaacgtcgactggatcaagagcgccgaaaaaaccggtgac
tacagcgtccgcctgcatttgaaaaaacctttccctccggcactggaatacctgtccaac
gccgttcccatgtttcccaagcagtacttcgagaaggtcggcctggctgaattcagccgc
aagccagtgggtaccgggccgtataaagccgtgtcggtggtggctggcgaaggcgtgacc
atggagatcaacaaggactactttccggacagcccacaaggcaagccgcatatcggccac
ctgaagttccgggtgattccggatgcagaaacccgtctggccgagttgatgaccgatggt
gtcgactggacgtggcgtgtgaccccggatcaggcagtcgaccttaaaggtatgccgaac
ctgaccgtgaccagcggcgaaaccatgcgcatcggcttcctgattctcgatgctcgaggc
acctccacggaaaactcgccgatgaagcagctcaaggtgcgtcaggccatcaaccatgcg
atcaaccgcaacgcgctggccacgcaactggtggggggcgaagccaagcccttgcaggtg
gcctgttatccaggccagttcggctgcgataccaccgcggccacggtctacaactacgac
ccggccaaggccaaggcgttgctcgccgaagccggtttccccaatggcttcgagacagaa
atcttcgcttatcgcgaccgggattacgtcgaagccatcatcggcaacctgcgggccgtg
ggcatcaacgccaagctgcgctacttgaagtacgccgccctgcgcgatcagcaacgtggc
ggcaaggtacccatgtcgtttcaggcctggggctcgttctcgatcctcgacacctcggcg
tcggccggcacctggttcaagggcaatccggacgacaacatcaaggatccgcaagtccag
agctggttgcagaccgctgacaacgccctcgacccgcaattgcgcaaggacaactaccgc
aaggcgttgcagcgcatcagcgaacaggcgtactgggcgccgctgttcaactactcgatg
aactacgcctacacctccgagctggcgttcacgtcgtacccggatgagctgccgcgtttc
gttcagtccagttggaagtaa
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