KEGG   Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a2428
Entry
PSEBR_a2428       CDS       T01472                                 
Name
(GenBank) Putative RNA polymerase sigma factor for flagellar regulon FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
pba  Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba02020  Two-component system
pba02025  Biofilm formation - Pseudomonas aeruginosa
pba02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pba00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PSEBR_a2428
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PSEBR_a2428
  09142 Cell motility
   02040 Flagellar assembly
    PSEBR_a2428
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pba03021]
    PSEBR_a2428
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:pba02035]
    PSEBR_a2428
Transcription machinery [BR:pba03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PSEBR_a2428
Bacterial motility proteins [BR:pba02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    PSEBR_a2428
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r4_2 Sigma70_r2 UPF0122 HTH_23 MarR_2 HTH_Tnp_ISL3 HTH_IclR HTH_5 DUF134
Other DBs
NCBI-ProteinID: AEA68707
UniProt: F2KFP1
LinkDB
Position
3031919..3032644
AA seq 241 aa
MQPSMVTDEPRNEGNDEQALWRNWLDSKTEAARSRLFFFYGQWLRMIVGLLYSRYPHPLA
EWGDYVNLASIGLLQAIDRFNPELNTRFQSYAEPYVKGNVLKGLSCYVGDRRRYYRERLE
SISGMQEEGRAESDLEQVANVAIGLAFGLFLESGIVDPEPKDNNPLSLYEVERESDTLEE
CVKLLSANEQRVIQGHYHQHLSFTEISELMGISKSRVSQLHAQALKNIRISHARLMAGDS
W
NT seq 726 nt   +upstreamnt  +downstreamnt
gtgcagccttccatggtgacggatgagccccgcaatgaaggcaatgacgagcaggcgttg
tggcgcaattggctggacagcaaaacagaggcggccaggagccggttgttctttttttat
ggccaatggcttcggatgattgtcgggcttttgtattctcgctacccacatccattggct
gagtggggggactacgtgaatctggcctcgattggccttttgcaggccattgaccggttc
aatccggaattgaatacgcgtttccagtcctatgccgaaccttatgtaaaaggtaacgtg
cttaagggcttgtcctgttatgtaggcgatcgacgtcgctattaccgggaacggctggag
agtatttccggcatgcaggaggagggccgagcggagtccgatctggagcaggtggcgaac
gtcgctatcggcttggcgttcgggttgtttctggagtctgggatcgttgaccctgagcca
aaggacaataatccgctaagcctctacgaagtggagcgtgaaagcgacacactggaggag
tgcgtgaagcttctttcggcgaatgaacagcgagtcatccaggggcactatcaccagcat
ttaagcttcaccgagattagcgaactcatgggcatctcgaagtcacgcgtttcacaattg
cacgcccaggcgttgaaaaacattcggataagccatgcaagattaatggccggggatagc
tggtag

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