Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a2536
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Entry
PSEBR_a2536 CDS
T01472
Name
(GenBank) putative porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba01501
beta-Lactam resistance
pba02020
Two-component system
Module
pba_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSEBR_a2536
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PSEBR_a2536
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pba02000
]
PSEBR_a2536
01504 Antimicrobial resistance genes [BR:
pba01504
]
PSEBR_a2536
Transporters [BR:
pba02000
]
Other transporters
Pores ion channels [TC:
1
]
PSEBR_a2536
Antimicrobial resistance genes [BR:
pba01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
PSEBR_a2536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
AEA68816
UniProt:
F2KFS0
LinkDB
All DBs
Position
complement(3155786..3157129)
Genome browser
AA seq
447 aa
AA seq
DB search
MLPAQHHSTVTLKPLWLLALLTGSAAPAMAAQLAQSTPGFLDGATLEVLSRNFYLNNDYR
TPTPAGKSYKQEWAQGFIASFESGFTPGTIGVGIDAHAFLGLKLDGGKGHSGTGLLPLDE
NGRSEDHYSSAGGALKFNTSRTTLAVGEMTVQSPVFDTADKRLQPEYASGLLLSSREVEG
VDLQAGHFSAFKNQDASTSKGDFSGYGATTRNGAIDFIGADLFTGQALGGALYASELSDT
WRQYYANLHATLGELFLDGNLYHTRDYGKANAGAIDTTAYSLSGKYRLNAQAFTLAYQKI
NGDTPFDFVGGDSIYLANSIKYADFNGPGERSWQARYDLDLGTLGVPGLSFMARYVTGRG
IDGSHAPQGGAYNLFDSDTGTYSPQQGAGGRHWERDLDLHYIVQSGPAKDLSLQLSHVTH
RANSSQGGDDIDRLYIVIQYPLKLGPF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgttgcctgcacaacaccactcaaccgtcaccctgaaaccgctctggctgcttgccctg
ctcaccggcagcgccgcaccggcgatggcagcgcagctcgcgcaaagcacgcctggcttt
ctcgacggcgcgacgctggaagtcctcagccgcaacttctacctcaacaatgactatcgc
accccgacaccggccggcaaaagctacaaacaggaatgggcccagggcttcatcgcctcg
ttcgagtccggcttcacccccggcacgatcggcgtaggcatcgatgcccacgcgttcctg
gggttgaaactggacggcggcaaggggcattccggaacgggattgttgccgctggatgag
aacggacgaagcgaggatcactactccagtgcgggtggcgcgctgaaattcaacacctca
cgcaccaccctggcggtcggcgaaatgactgtgcagagcccggtattcgacaccgcagac
aagcgcctgcaacccgaatacgccagcggcctgctgctctccagccgcgaggtcgaaggg
gtcgatctgcaggcgggccacttcagtgcgttcaagaatcaggacgcctcgaccagcaag
ggtgacttttccgggtatggggcgacgacgcgcaacggcgccatcgacttcatcggcgcc
gacctgttcaccggccaagccctgggcggcgcgctctacgcctccgaactgagcgacacc
tggcgccagtactatgccaacctgcatgccacccttggcgaactgttccttgacggcaac
ctgtatcacacccgcgactatggcaaggccaacgccggggccatcgacaccacagcttat
agcctgagtggcaaataccggctcaatgcccaggcgttcaccctggcctatcagaaaatc
aacggcgacacgcccttcgatttcgtcggcggcgactccatctacttggccaactcgatc
aaatatgccgacttcaacggcccgggtgagcgctcatggcaagcgcgctacgaccttgac
ctgggcaccttgggcgtccccggcctgagcttcatggcccgctatgtgactggacgcggg
atagacggcagccatgccccccaaggcggcgcctataacctgttcgatagcgacactggc
acttacagtccgcaacaaggcgctggcggacgccattgggagcgcgacctggacctgcat
tacatcgtgcagtcaggcccggccaaggacctgtcgctgcaactgtcccatgtcacccat
cgcgccaatagcagccagggcggcgatgacatcgaccggctgtatatcgtcatccagtac
cccctcaagctggggccgttctga
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