Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a2673
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Entry
PSEBR_a2673 CDS
T01472
Name
(GenBank) Transcriptional regulator, LysR family
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pba03000
]
PSEBR_a2673
Transcription factors [BR:
pba03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PSEBR_a2673
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_5
HTH_24
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AEA68967
UniProt:
F2KHB8
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Position
3323575..3324459
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AA seq
294 aa
AA seq
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MNVSFRQLRAFILIAETSSFTRTAEQLHLSQPALSYSIRKLEESMGLQLLARNTRSVELT
PAGEHFLPQARRMLRDMNDAVRDARDTLSLSRGTLRLAALPTAAASFLPIAIASFQHENP
GVTVSLLDGRAGEVMGWVQRGEVDAGISSLPDDLSGLSFVRLLDDNLVLLSQKDPQRDGQ
DDWKRQPYIALTPDTSIRPLADAALRYLNVDPVPAWEVAHMSTATALVREGLGFSLLPAS
CTAVFNIGEQCAVTAIDQPAKRSIGLLQRKPVAQSPSLSQFMQHLRQVLLSHGH
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtttcttttcgtcagcttcgtgccttcatccttattgccgagacttcgagcttt
acccgcacggccgaacagttgcacctgtcccagccggcgctgagctatagcatccgcaaa
ttggaagagagcatggggctgcagttgctcgcgcgtaatacccgcagcgtcgagctgact
ccggccggtgagcattttctaccccaggcccggcgtatgctccgggacatgaacgacgcc
gtgcgcgatgctcgtgacactctgagcctgagccgtggcacgctccggctggcggccttg
cccaccgctgcggcgtcattcctgccgattgccattgcttctttccagcatgaaaacccc
ggcgtgacggtgagtttgttagacggccgcgccggggaagtcatgggctgggtgcagcga
ggagaggtggacgccggcatcagttcgttgcctgacgatctgtccggactgagctttgtg
cgcctgttggatgacaacctggtgttgctgagccaaaaggacccgcagcgtgacggccag
gacgactggaagcggcaaccctatattgccctcacgcctgacaccagcatccggcccctg
gctgacgctgcgttgcgctatttgaacgttgaccctgtgccggcctgggaagtggcgcac
atgagcacggccacggccctggtgcgcgaaggattgggattttctctgttgccggccagt
tgcacggcggtgttcaacatcggtgagcagtgtgctgtcaccgccatcgaccagccggcg
aagcgctcgatcggcctgttgcagcgcaagccggtggcccaatcaccttcattgagccag
ttcatgcagcatttgcgacaggtgctgctcagccacggacactga
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