Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a2776
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Entry
PSEBR_a2776 CDS
T01472
Name
(GenBank) putative GntR-family regulatory protein
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pba03000
]
PSEBR_a2776
Transcription factors [BR:
pba03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PSEBR_a2776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_24
MarR_2
HTH_IclR
DUF6880
HTH_Crp_2
TrmB
Fe_dep_repress
HTH_CodY
HTH_11
HTH_27
GMT-wHTH
HTH_36
HTH_5
HTH_41
Ribosomal_S25
MarR
HTH_29
HTH_28
HTH_23
HTH_20
PLU-1
TFIIE_alpha
Motif
Other DBs
NCBI-ProteinID:
AEA69075
UniProt:
F2KG19
LinkDB
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Position
complement(3440156..3440908)
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AA seq
250 aa
AA seq
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MKRLPLDDSFKVNRNPVTLREIVLDKLRSAIMNFQLLPGDRLVERDLCDRLGVSRTSVRE
ALRHLESEGLVEFADAKGPRVAIITLADAVDIYELRCVLEGLIVQLFTLRAKAKDIKALE
KALAENRKALKEGELQQVIDSVQGFYDVLLEGSGNHVAATQLRQLQARISYLRATSVSQE
NRRGDSNQEMERMVEAIKSGDPLAAHQACVDHVRAAAKVALDYLKRKQEETGEIPEIIPP
IALKEPRIGR
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcctgccactcgacgacagcttcaaggtcaatcgcaaccccgttaccctgcgc
gagatcgtgctggataaactgcgaagcgccatcatgaacttccagcttctgccgggtgat
cgcctggtcgaacgcgatctgtgcgatcgcctgggtgtgagccgcacgtcggtacgcgaa
gcgctgcgccacctggaatccgaaggcctggtggagtttgccgatgccaaggggccgcga
gtcgccattattactttggccgacgccgtggatatctatgagctgcgttgcgtgctcgaa
ggcctgatcgtccaattgttcaccctgcgggccaaggccaaggacatcaaggccctggaa
aaagccctcgcggaaaaccgcaaggccctcaaggagggcgaactgcaacaggtcatcgat
tcggtgcaaggcttctacgacgtattgctcgaaggctccggcaaccatgtcgccgccacc
cagttgcgccagttgcaggcacgcatcagctatttgcgggcaacctcggtgtcccaggaa
aaccgtcgcggcgacagcaaccaggaaatggaacgcatggtcgaggcgatcaagagcggc
gatcccctggcggcccaccaggcctgcgtcgaccacgtgcgcgccgccgccaaggtcgcc
ctggattacctcaagcgcaaacaggaagagaccggtgaaatccccgagataatcccgccc
atcgccctcaaagaaccgcgcataggtcgctag
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