Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a2969
Help
Entry
PSEBR_a2969 CDS
T01472
Name
(GenBank) Conserved hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pba01002
]
PSEBR_a2969
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pba01011
]
PSEBR_a2969
Peptidases and inhibitors [BR:
pba01002
]
Cysteine peptidases
Family C82
PSEBR_a2969
Peptidoglycan biosynthesis and degradation proteins [BR:
pba01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PSEBR_a2969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AEA69272
UniProt:
F2KGD6
LinkDB
All DBs
Position
complement(3658621..3660183)
Genome browser
AA seq
520 aa
AA seq
DB search
MFKKSACYLSLLLLTAPLVATAEDSDPALVQTTLAQLAVACPKVAASVDFQALLDLQAFY
QQNAGQEAWADDERRRALQVQLQQLADDGLDPTRYNLPAQGADQGAHCVDIAISQRYLKA
LHDLRFGYLPQERLEPVWKANPPPQDHQAVVLAIAGVGLQNVASAFEQARPNLDLYRNLR
GLYARLRQQPLSDWQPVPGGPLLQPDKQDARVPALAQRLFNEGYLSTPPLVTDEHYSPTL
VEAMKSFQLQHSLQADGVVGPWTVTELNISPAMRREQLRINLERMRWLAQDVENDSVLVN
VAAAQLTVYRGGEPIWQTRTQVGRAQRQTPLLKSHVTRLTLNPTWTIPPTIMREDKLPEI
RRDPEFLARHNLRILDSEGLPLMAEDIDWEHPGNLMLRQDPGPKNPLGKMAIRFPNPFSV
YLHDTPSQALFSKGPRAFSSGCVRIEQVMHLRDLLVSPAERARTDTLLASETTHEFRLAR
PVPILLGYWTAQADSQGQPLYIPDIYARDATLSAAQGRAL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaaaagtccgcatgttacctgagccttttattgctcactgcgccattggtcgcg
acagccgaagacagcgatccggcgctcgtgcagacgacactggcgcaattggcggtcgcg
tgtccaaaagtagcggcaagtgtcgactttcaggcgttgctcgacttgcaggcgttctat
cagcaaaacgcaggccaggaagcctgggcggacgacgaacgacggagggcgttgcaggtc
cagttgcaacaactggccgacgacggcctggatccaacccgctataacctaccggcccag
ggggcagaccagggtgctcattgtgtcgacatcgccatcagccaacgctacctgaaagcc
ttgcatgacctgcgtttcggctatttgccccaagagcgtctggaaccggtatggaaggcc
aacccgccgccacaggatcaccaggccgtggttctggccatcgccggggtaggcctgcag
aacgtcgccagtgcctttgaacaggcccggccgaaccttgacctttatcgcaacctgcgc
gggctttatgcccggctgcggcaacagcctttatccgactggcaacccgtgcccggcggg
ccgctgctgcaaccggacaagcaggacgctcgcgtacccgccctggcccagcgactgttc
aacgaaggttacttgagtacaccaccgttggtgacagacgagcactacagtcccacgctg
gtggaggcgatgaagagcttccagctccagcattcgctgcaggccgatggggtggtgggg
ccgtggaccgtgaccgagctgaacatcagcccggccatgcgtcgcgagcagttgcgcatc
aatctggaacgcatgcgctggctggcccaggacgtggagaacgacagcgtcctggtcaac
gtggcggcggcccagttgacggtttatcgaggcggcgagccaatctggcaaacccgcacc
caggtgggccgtgcgcaacggcagacaccgttgctcaagtcccacgtcacccgactgacg
ctcaacccgacctggaccatcccccccaccatcatgcgcgaagacaaactgcccgagatc
cgccgtgatccggagtttctcgcccgtcataacttgcggatcctcgacagtgaaggcctg
ccgttgatggcagaggatatcgactgggagcacccgggcaacctcatgctgcgccaggat
ccaggcccgaagaatccgttgggcaaaatggcgatccgctttcccaatccgttctcggtg
tacctgcatgacaccccgagccaggcgctgttcagcaaaggtccgcgagccttcagttca
ggctgcgtgcggatcgagcaagtgatgcacttgcgcgacttgctggtaagcccggccgaa
cgcgcacgcaccgatacactgctggccagcgagacgacccatgagttccggttggcccgg
cccgtgccgatcctgctggggtactggacagcacaagcggacagccagggccagccgttg
tacatcccggatatctatgctcgtgacgcgacattgtctgctgcccaggggcgggcactc
tga
DBGET
integrated database retrieval system
