Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a3010
Help
Entry
PSEBR_a3010 CDS
T01472
Name
(GenBank) putative glycogen debranching protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba00500
Starch and sucrose metabolism
pba01100
Metabolic pathways
pba01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PSEBR_a3010
Enzymes [BR:
pba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
PSEBR_a3010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Glyco_hydro_31_2nd
GHL5
Motif
Other DBs
NCBI-ProteinID:
AEA69314
UniProt:
F2KHM8
LinkDB
All DBs
Position
3716697..3718856
Genome browser
AA seq
719 aa
AA seq
DB search
MTRPKKNTPPPVIEASRIREGLPFPLGATWDGLGVNFALFSANATKVELCIFDDAGEVEL
ERIELPEYTDEIYHGYLPDAHPGLIYGYRVYGAYDPANGHRFNPNKLLIDPYAKQLVGQL
KWSEALFGYTIGHPDGDLSFDERDSAPFVPKCKVIDPAHTWGHDHRVSVPWDKTILYETH
VRGLTMRHPSVPENLRGTFAGLMVDDVLEHIRKLGVSSVELLPIHAFVNDQHLLHKGMTN
YWGYNSIAFFAPDPRYLASGKIAEFKEMVAHLHEANLEVILDVVYNHTAEGNEQGPTLSM
RGIDNASYYRLMPDDKRYYINDSGTGNTLDLSHPCVLQMVTDSLRYWATEMHVDGFRFDL
ATILGRYHDGFDERHSFLVACRQDPVLRQVKMIAEPWDCGPGGYQVGRFPPGWVEWNDKF
RDTVRAFWKGDDGQLADFASRMTASGEMFNQRGRRPYASVNFVTAHDGFTLHDLVSYNDK
HNEANDENNQDGSNNNLSWNHGVEGPTDDPEINALRHRQMRNFFATLLLAQGTPMIVAGD
EFARTQHGNNNAYCQDSEIGWVNWDLSEDGAALLKFVKRLIKLRLTYPILRRGRFLVGNY
NEDIGVKDVTWLAPDGSEMTIEQWQDSHGRCLGMLMDGRAQETGIRRKAGDATLLLVVNA
HHDIVNFRLPEVPEGSFWTCMVDTNQPTVRGQERFDFDSEYSVTGRSLLLFELQREEEE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtccaaaaaaaaacacgccgccgcccgtgatcgaggcttcgcggattcgtgaa
gggctgccttttccactgggtgcaacctgggatggcctcggggtcaatttcgcgctgttt
tcagccaatgccaccaaggtcgaactgtgcatcttcgatgatgccggcgaagtcgaactc
gaacgcatcgagctgccggagtacaccgacgagatttaccacggctatctgccggatgcc
cacccgggcttgatctatggctaccgggtctacggtgcatacgacccggcgaacggccac
cgtttcaacccgaacaagctgctgatcgacccgtatgccaagcaactggtcggccagttg
aagtggtccgaagccctctttggctacaccattggccatcccgatggcgacctcagtttc
gatgagcgcgacagcgccccgttcgtccccaagtgcaaggtcatcgaccctgcgcacacc
tggggtcacgaccatcgcgtcagcgtcccctgggacaagaccatcctgtatgagacccat
gtgcgcggcctcaccatgcgtcacccttcggtgcccgagaacctgcgcggtacgttcgcc
gggctgatggtcgacgatgtgctggagcatatccgcaagctgggtgtctcgtcggtggaa
ctgctgcccatccatgccttcgtcaatgaccagcacttgctgcacaaaggcatgaccaac
tactggggttacaacagcatcgccttctttgccccggacccacgctacctggccagcggc
aagatcgccgagttcaaggagatggtcgcccacctgcatgaggccaacctggaagtcatc
ctcgacgtggtctacaaccacaccgccgaaggcaacgaacagggccccaccctgtccatg
cgcggcatcgataacgcctcgtactaccggctgatgcccgacgacaaacgctattacatc
aacgattccggcaccggtaataccctggacctgagccatccttgcgtgctgcaaatggtc
accgactccctgcgctattgggccacggagatgcacgtcgacggcttccgcttcgacctg
gcgaccattctgggccgttaccatgacggcttcgacgagcgccacagcttcctcgtggcc
tgtcgccaggacccggtgctgcgccaggtaaaaatgatcgccgagccctgggactgcggc
cccgggggctaccaggtgggacgcttcccgccgggctgggtcgagtggaacgacaaattc
cgcgacacggtgcgggccttctggaagggcgacgacggccagcttgccgatttcgccagc
cgaatgacggcctcgggcgagatgttcaaccagcgtggccggcgtccgtacgcctcggtg
aacttcgtcaccgcccatgacggtttcaccttgcatgacctggtgtcgtacaacgacaag
cacaacgaggccaacgacgagaacaaccaggacggcagcaataacaacctgtcctggaac
catggcgtcgaagggccgacggacgatccagagatcaacgcgctgcgtcatcggcagatg
cgcaacttcttcgccaccctgctgctggcccaaggcacgccgatgatcgtcgctggcgac
gaattcgcccgtacccagcacggcaataacaacgcctattgccaggacagcgagatcggt
tgggtcaattgggacctgagcgaggatggcgcggcgctgctcaagttcgtcaagcgcctg
atcaagttgcgcctgacctatccgatcctgcggcgcgggcggttcctggtgggtaactac
aacgaggacattggcgtcaaggacgtcacctggctggccccggacggcagcgaaatgacc
attgagcaatggcaggacagccatggtcgctgcctcggcatgctgatggacggccgcgca
caggagaccggcattcgacgcaaggccggcgatgcgacgctgctgctggtggtcaacgcc
caccatgacatcgtcaacttccgcttgccggaagtccccgagggcagcttctggacctgc
atggtcgacaccaaccagccgaccgttcgtggacaagagcgcttcgatttcgattccgaa
tattccgtcaccgggcgctcgctgctgctgttcgagctgcaacgcgaagaagaggaatga
DBGET
integrated database retrieval system
