Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a3076
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Entry
PSEBR_a3076 CDS
T01472
Name
(GenBank) putative circadian oscillation regulator KaiC
KO
K08482
circadian clock protein KaiC
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
PSEBR_a3076
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
RecA
Rad51
DnaB_C
AAA_16
nSTAND3
IstB_IS21
SLFN-g3_helicase
AAA_5
PAXNEB
MEDS
AAA_24
AAA_22
PhoH
CbiA
NPHP3_N
DEAD
AAA
ABC_tran
AAA_7
ResIII
AAA_11
AAA_19
AAA_30
Mg_chelatase
GvpD_P-loop
NACHT
Zot
Nop5_56-rel_N_Arc
DAP3
DUF7504
Motif
Other DBs
NCBI-ProteinID:
AEA69383
UniProt:
F2KHU7
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Position
3803558..3805060
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AA seq
500 aa
AA seq
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MSTSNELISAKAATGIEGLDDVLSGGLSRGHVFLLEGEPGTGKTTVALHFLLAGAKAGER
SLYITLSETERELRQGATSHGWTLDDNIHIFELTPPESLLNAEHQQSLLYSSDLELGEAT
RQIFEVVERVKPTRVVLDSLSEIRLLAQSSLRYRRQILAIKHYFVRYDATVLLLDDLTTE
SLDKTVHSVAHGVIRLEELTPNYGAERRRIRVVKYRGQKYRGGYHDFTIMGDGVHVFPRL
VAAEHRGQYLRQQLSSGIGELDALLGGGIETGSSTLILGPAGTGKSLIALIFAAAAVHRG
EKAALFIFDEELGLLFERMKNIGIDLQALQETGNLLIEQVDAAELSPGEFSHRVRRCVDE
GDIKTVVIDSINGYQAAMPEENALVLHMHELLLYLNRKGAATFMTVAQHGLVGDMQAPVD
ITYLADTVILLRYFEALGKVRRAISIIKKRTGSHESTIREYRISGLGMTIGEPLEAFQGV
LRGVPTYMGESNPLLRDEHR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
ttgtctacatctaacgagttgatcagtgcaaaagccgccaccggcatcgaaggactggac
gatgtcctttccggtggtttgtcccgcggccatgtgttcctgcttgagggggaaccgggg
actggtaagaccacggtcgcgctgcattttctgttggccggcgccaaggctggcgagcgc
tcgttgtacatcacgctatcggaaaccgagcgtgaactgcgtcagggcgcaacctcccac
gggtggacgctggacgacaacattcatattttcgaactgaccccgcccgaaagcctgctc
aatgccgagcaccagcagagcctgctgtactcctcggacctggagttgggcgaagcgacc
cgacagatcttcgaagtggtcgaacgggtcaagccgacccgggtggtgctcgacagcctg
tcggagattcgcctgctggcgcaaagctccttgcgctatcgtcgccagatcctcgcaatc
aagcactacttcgtgcgctacgacgccacagtcctgctgctcgacgacctgaccaccgaa
tccctcgacaagaccgtccacagtgtcgcccacggggtgattcgcctggaagaactgacc
cccaactatggcgccgaacgacgcaggatccgggtggtcaagtatcgcgggcagaaatac
cgtggtggttaccatgacttcaccatcatgggcgacggcgtacacgtcttcccacgcctg
gtggccgccgaacaccgtggccaatacctgcgccagcaactctccagcggcatcggcgaa
ctggacgccctgctgggtggcggtatcgagaccggttccagcacgttgatcctcggcccg
gcggggaccggcaagtcgctgatagcactgatttttgccgcagccgccgtgcatcgcggc
gagaaggccgcgctgttcatcttcgatgaagaactgggcttgttgttcgaacgcatgaaa
aacatcggcatcgacctgcaagccctgcaagagaccggcaacctgctgatcgaacaagtg
gacgccgccgagctgtcccctggcgagttctcccaccgcgtgcgccgttgtgtcgatgag
ggcgatatcaagaccgtggtcatcgacagcatcaatggctatcaggcggccatgccggaa
gagaacgccctggtgctgcacatgcatgaattgttgctctacctcaaccgcaagggcgcg
gcgaccttcatgactgttgcgcagcacggtctggtcggcgacatgcaggcgcccgtggac
attacttacctggctgacacggtgattcttttgcgttatttcgaagcactgggcaaagtg
cgccgggcgatttccatcatcaagaaacgtacgggcagccatgagtcgaccatccgcgaa
taccgcatcagcggcttgggcatgaccatcggcgagccgctcgaggcgttccaaggcgtc
ttgcgaggggttcccacttacatgggcgagagcaacccgctgctcagggatgaacaccgg
tga
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