Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a3076
Help
Entry
PSEBR_a3076 CDS
T01472
Name
(GenBank) putative circadian oscillation regulator KaiC
KO
K08482
circadian clock protein KaiC
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
PSEBR_a3076
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATPase
AAA_25
RecA_N
Rad51
AAA_16
DnaB_C
DUF7125
nSTAND3
SLFN-g3_helicase
AAA_5
PAXNEB
nSTAND_NTPase5
MEDS
IstB_IS21
AAA_22
PhoH
CbiA
NPHP3_N
DEAD
AAA_24
AAA
AAA_7
ResIII
AAA_11
AAA_19
AAA_30
Mg_chelatase
GvpD_P-loop
NACHT
DUF7504
Motif
Other DBs
NCBI-ProteinID:
AEA69383
LinkDB
All DBs
Position
3803558..3805060
Genome browser
AA seq
500 aa
AA seq
DB search
MSTSNELISAKAATGIEGLDDVLSGGLSRGHVFLLEGEPGTGKTTVALHFLLAGAKAGER
SLYITLSETERELRQGATSHGWTLDDNIHIFELTPPESLLNAEHQQSLLYSSDLELGEAT
RQIFEVVERVKPTRVVLDSLSEIRLLAQSSLRYRRQILAIKHYFVRYDATVLLLDDLTTE
SLDKTVHSVAHGVIRLEELTPNYGAERRRIRVVKYRGQKYRGGYHDFTIMGDGVHVFPRL
VAAEHRGQYLRQQLSSGIGELDALLGGGIETGSSTLILGPAGTGKSLIALIFAAAAVHRG
EKAALFIFDEELGLLFERMKNIGIDLQALQETGNLLIEQVDAAELSPGEFSHRVRRCVDE
GDIKTVVIDSINGYQAAMPEENALVLHMHELLLYLNRKGAATFMTVAQHGLVGDMQAPVD
ITYLADTVILLRYFEALGKVRRAISIIKKRTGSHESTIREYRISGLGMTIGEPLEAFQGV
LRGVPTYMGESNPLLRDEHR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
ttgtctacatctaacgagttgatcagtgcaaaagccgccaccggcatcgaaggactggac
gatgtcctttccggtggtttgtcccgcggccatgtgttcctgcttgagggggaaccgggg
actggtaagaccacggtcgcgctgcattttctgttggccggcgccaaggctggcgagcgc
tcgttgtacatcacgctatcggaaaccgagcgtgaactgcgtcagggcgcaacctcccac
gggtggacgctggacgacaacattcatattttcgaactgaccccgcccgaaagcctgctc
aatgccgagcaccagcagagcctgctgtactcctcggacctggagttgggcgaagcgacc
cgacagatcttcgaagtggtcgaacgggtcaagccgacccgggtggtgctcgacagcctg
tcggagattcgcctgctggcgcaaagctccttgcgctatcgtcgccagatcctcgcaatc
aagcactacttcgtgcgctacgacgccacagtcctgctgctcgacgacctgaccaccgaa
tccctcgacaagaccgtccacagtgtcgcccacggggtgattcgcctggaagaactgacc
cccaactatggcgccgaacgacgcaggatccgggtggtcaagtatcgcgggcagaaatac
cgtggtggttaccatgacttcaccatcatgggcgacggcgtacacgtcttcccacgcctg
gtggccgccgaacaccgtggccaatacctgcgccagcaactctccagcggcatcggcgaa
ctggacgccctgctgggtggcggtatcgagaccggttccagcacgttgatcctcggcccg
gcggggaccggcaagtcgctgatagcactgatttttgccgcagccgccgtgcatcgcggc
gagaaggccgcgctgttcatcttcgatgaagaactgggcttgttgttcgaacgcatgaaa
aacatcggcatcgacctgcaagccctgcaagagaccggcaacctgctgatcgaacaagtg
gacgccgccgagctgtcccctggcgagttctcccaccgcgtgcgccgttgtgtcgatgag
ggcgatatcaagaccgtggtcatcgacagcatcaatggctatcaggcggccatgccggaa
gagaacgccctggtgctgcacatgcatgaattgttgctctacctcaaccgcaagggcgcg
gcgaccttcatgactgttgcgcagcacggtctggtcggcgacatgcaggcgcccgtggac
attacttacctggctgacacggtgattcttttgcgttatttcgaagcactgggcaaagtg
cgccgggcgatttccatcatcaagaaacgtacgggcagccatgagtcgaccatccgcgaa
taccgcatcagcggcttgggcatgaccatcggcgagccgctcgaggcgttccaaggcgtc
ttgcgaggggttcccacttacatgggcgagagcaacccgctgctcagggatgaacaccgg
tga
DBGET
integrated database retrieval system
